Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl04g00679 | ATGGATAAAAAACCCTGCAAGTCCCAAGAAACTGAGGTGAGGAAAGGACCATGGACGATGGAAGAGGACTCGATTCTGACCAACTACATCGCGAACCACGGAGAAGGTGTATGGAACTCGCTAGCTCGATCAGCAGGCCTGAAACGCACCGGAAAAAGCTGCCGCCTCCGATGGCTCAACTACTTAAGGCCAGACGTCCGGAGGGGTAATATTACACCTGAAGAACAACTTTTGATCCTCGAACTACATTCTAGGTGGGGAAACAGGTGGTCAAAAATTGCAAGGCACCTACCAGGCAGAACCGATAATGAAATAAAGAATTACTGGAGGACGAGAATTCAAAAACATATCAAGCAAGCAAAACCATTTCCCAGCCAGAAATCGGAGCTGAACCATAGTGCAAGCACAAATCACACGTCGGGCGTTGAAGATGGAGTTGAAGACTATTCCGCAACGTATACAGGAAATCTTGAGGCTTTACAGTGTCCTTTACCTACTGAATCAAATGAAAACTTCTGGAGCATGGAGGATCTATGGTCCATGCAGTTCTTTAATGGTGATTGA | 564 | 0.461 | MDKKPCKSQETEVRKGPWTMEEDSILTNYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLILELHSRWGNRWSKIARHLPGRTDNEIKNYWRTRIQKHIKQAKPFPSQKSELNHSASTNHTSGVEDGVEDYSATYTGNLEALQCPLPTESNENFWSMEDLWSMQFFNGD* | 188 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl04g00679 | 187 | SMART | sant | 14 | 64 | IPR001005 | - | |
Eupl04g00679 | 187 | SMART | sant | 67 | 115 | IPR001005 | - | |
Eupl04g00679 | 187 | Pfam | Myb-like DNA-binding domain | 68 | 111 | IPR001005 | - | |
Eupl04g00679 | 187 | Pfam | Myb-like DNA-binding domain | 15 | 62 | IPR001005 | - | |
Eupl04g00679 | 187 | Gene3D | - | 72 | 141 | - | - | |
Eupl04g00679 | 187 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 63 | 117 | IPR017930 | - | |
Eupl04g00679 | 187 | ProSiteProfiles | Myb-like domain profile. | 10 | 62 | IPR001005 | - | |
Eupl04g00679 | 187 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 12 | 62 | IPR017930 | - | |
Eupl04g00679 | 187 | PANTHER | MYB TRANSCRIPTION FACTOR-RELATED-RELATED | 9 | 128 | IPR044676 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl04g00679 | 187 | FunFam | Myb transcription factor | 15 | 67 | - | - | |
Eupl04g00679 | 187 | MobiDBLite | consensus disorder prediction | 124 | 143 | - | - | |
Eupl04g00679 | 187 | SUPERFAMILY | Homeodomain-like | 13 | 109 | IPR009057 | - | |
Eupl04g00679 | 187 | ProSiteProfiles | Myb-like domain profile. | 63 | 113 | IPR001005 | - | |
Eupl04g00679 | 187 | Gene3D | - | 12 | 68 | - | - | |
Eupl04g00679 | 187 | MobiDBLite | consensus disorder prediction | 120 | 146 | - | - | |
Eupl04g00679 | 187 | FunFam | Myb-related protein 305 | 72 | 142 | - | - | |
Eupl04g00679 | 187 | CDD | SANT | 72 | 111 | IPR001005 | - | |
Eupl04g00679 | 187 | CDD | SANT | 17 | 62 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl04g00679 | Eupl-Chr4 | 10312952 | 10315007 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl04g00679 | 7 | 187 | MYB Transcription Factor Family | AT3G01530 | 56.842 | 1.34e-75 | 224 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Eupl04g00679 | Myb_DNA-binding | 1.8e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl04g00679 | K09422 | - | msin:131235409 | 306.99 |