Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00644 ATGACCACTATAGATCTCGAATCCGATTTCGATTTAGCCTATCGATTACGGATGGAGGAAGCCATGGTTGCATCTCTTGCCCTTCAACCTTACTCCGTCTTCGGCACCTGCACTACCTCTATTAATGGAGTCCCAATTCGCCGCATCGGAAAACGACATCTCTCACCTCACGAATCTTCAAACCCTAGAACTGGACAAGTTCCAGCAAGAACGAAAGTATCGCGAGCAATGCGAATCCGAGTTGCGCAGACTCTATTCACGATCAGAAGTTCGCGCGAGAGATTCGTCAGGTTGTATTTCAAGGGTTTGGTTAGCGATGAGTCGGTTCGGGGTTCAAAGGTTACGCTTGCGGCGGTCGGGACTGCAATTTGCAATCCTGGGGATACTTTGTTTCTGAAGGTACAGAAGCCGTTGATCGGCGATTTGAAGAATCATCGGACCATAGAGCTGATGGCTTTGATCGAAGGTCTCAATGCCGCTCTTTCTTTGGATGTAAAGAGGATCGACTTTTTGTGCGATTACTTCCCGCTCTACCAACATGTGAGTGAGTTCCACAGTTCCACTTAG 567 0.4815 MTTIDLESDFDLAYRLRMEEAMVASLALQPYSVFGTCTTSINGVPIRRIGKRHLSPHESSNPRTGQVPARTKVSRAMRIRVAQTLFTIRSSRERFVRLYFKGLVSDESVRGSKVTLAAVGTAICNPGDTLFLKVQKPLIGDLKNHRTIELMALIEGLNAALSLDVKRIDFLCDYFPLYQHVSEFHSST* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00644 188 Pfam Reverse transcriptase-like 113 182 IPR002156 GO:0003676|GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00644 Eupl-Chr4 9868368 9869029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00644 97 173 C3H Transcription Factor Family AT2G19610 37.975 4.01e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00644 - - ming:122085469 124.405