Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00637 ATGGAAAGGAGGGGTTTTCTTTTCTGGAGAGTTGGTTTACTGGTTTTGGCATGGATGGAGAGATCTTCTGCAACTCTTTCTCCTGCTGGTATAAACTATGAAGTTGTAGCTTTGATGGGGATAAAATATGATCTAAATGATCCACATAATGTATTGGAGAACTGGGATATTAATTCAGTAGATCCTTGTAGCTGGAGGATGGTTACCTGCTCCACCGATGGCCACGTGTCCGTCCTAGGGCTCCCGAGTCAGAACTTGTCTGGGACATTATCGCCAGGGATTGGAAACCTCAGTAACCTGCAATCTGTGTTGCTGCAGAATAATGCCATTTTTGGTCCTATTCCTGCCGACATCGGAAAGTTGGAGAAGCTACAAACACTTGATCTCTCAAACAATAATTTCATTGGTGGAATACCAAGTTCTTTGGGGGACCTTAAGAACCTGAATTATCTACGACTGAATAACAACAGCCTTTCTGGACCCTGCCCTGCTTCTCTGTCCAACATTGAAGCTCTTACTCTCTTGGACCTTTCTTATAACAATCTTAGCGGTTCCTTGCCAAAAATACCTGCAAGAACTTTCAAAATTGTTGGAAACCCTTTAATTTGTGGGCCGATTTCAGAGAACTGTTCCGCTGTTTCTCCTGAGCCACTTTCCTTCTCACCTGATGCTCTAAAAGAACAATCACAATCAGAGGGAACAAGAAGCCACCGGCTGGTTATTGCATTTGCTTCAAGTGTCGGGTCTGTTTCTCTAGTTATAATTGCTGTCGGGTTTCTTCTATGGTGGAGATACAGACACAACCAGCAGATTTTCTTTGATGTCAACGATCAATATGATCCAAATGTACGCTTGGGTCATTTGAAGAGGTATGCCTTTAAGGAGCTACGAGCAGCCACTGACCATTTCAACACAAAGAACATTTTAGGGAGGGGTGGATTCGGAATTGTTTACAAGGGAAGCTTGCAAGACGGGACTGTAGTGGCCGTTAAAAGGTTGAAAGACTATAATGCACTTGGTGGCGAAGTCCAATTCCAGACGGAAGTGGAGATGATAAGTTTGGCAGTCCATCGGAATCTCCTCCATCTTTGTGGATTTTGCACGACAGAGAATGAACGGCTCCTTGTCTATCCCTATATGCCAAATGGAAGCGTCGCTTCTCAATTAAGAGATCATGTTCATGGTAAGCCAGCTTTAGACTGGTCAAGGAGAAAGAGGATAGCACTAGGAACAGCTAGGGGACTACTGTATTTGCATGAGCAGTGTGACCCCAAAATTATACATCGTGACGTGAAAGCAGCCAACATCCTTCTTGATGAAGACTTCGAGGCAGTTGTTGGGGATTTTGGGTTGGCAAAGCTTTTGGATCACCGGGATTCTCATGTGACCACTGCTGTGCGTGGGACCGTTGGTCACATTGCTCCGGAGTACCTATCGACTGGCCAGTCGTCAGAAAAGACAGACGTGTTTGGTTTCGGTATCTTGCTCCTAGAGCTCATTACAGGTCAGAAGGCTTTGGATTTTGGACGCGTGGCAAACCAGAAAGGTGTAATGCTTGATTGGGTGAGGAAACTTCATCAGGAGGAAAAACTCAATCTAATGGTAGATAAGGATCTAAAGAACAATTTTGACAGGGTGGAATTAGAGGAAATGGTAAAGGTTGCCCTCCTGTGTACCCAATTCCACCCTTCTCACCGCCCAAAAATGTCCGAAGTGCTGAGAATGTTAGAAGGTGACGGCCTCGCTGAGAAATGGGAGGCTTCACAGAAGATTGATACACCGAGATTCCGATCATTTGAGAACCCACCTCAGAGATATTCTGATTTTATAGAGGAATCTTCGCTGGTCGTCGAAGCAATAGAGCTTTCCGGCCCGAGGTGA 1881 0.4508 MERRGFLFWRVGLLVLAWMERSSATLSPAGINYEVVALMGIKYDLNDPHNVLENWDINSVDPCSWRMVTCSTDGHVSVLGLPSQNLSGTLSPGIGNLSNLQSVLLQNNAIFGPIPADIGKLEKLQTLDLSNNNFIGGIPSSLGDLKNLNYLRLNNNSLSGPCPASLSNIEALTLLDLSYNNLSGSLPKIPARTFKIVGNPLICGPISENCSAVSPEPLSFSPDALKEQSQSEGTRSHRLVIAFASSVGSVSLVIIAVGFLLWWRYRHNQQIFFDVNDQYDPNVRLGHLKRYAFKELRAATDHFNTKNILGRGGFGIVYKGSLQDGTVVAVKRLKDYNALGGEVQFQTEVEMISLAVHRNLLHLCGFCTTENERLLVYPYMPNGSVASQLRDHVHGKPALDWSRRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDFGRVANQKGVMLDWVRKLHQEEKLNLMVDKDLKNNFDRVELEEMVKVALLCTQFHPSHRPKMSEVLRMLEGDGLAEKWEASQKIDTPRFRSFENPPQRYSDFIEESSLVVEAIELSGPR* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00637 626 ProSiteProfiles Protein kinase domain profile. 303 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00637 626 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 27 587 - -
Eupl04g00637 626 FunFam Somatic embryogenesis receptor-like kinase 1 380 596 - -
Eupl04g00637 626 SUPERFAMILY Protein kinase-like (PK-like) 279 577 IPR011009 -
Eupl04g00637 626 Gene3D Transferase(Phosphotransferase) domain 1 380 595 - -
Eupl04g00637 626 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 212 - -
Eupl04g00637 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Eupl04g00637 626 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Eupl04g00637 626 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Eupl04g00637 626 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Eupl04g00637 626 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Eupl04g00637 626 FunFam Somatic embryogenesis receptor kinase 1 272 379 - -
Eupl04g00637 626 SMART serkin_6 303 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00637 626 Pfam Protein tyrosine and serine/threonine kinase 305 576 IPR001245 GO:0004672|GO:0006468
Eupl04g00637 626 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Eupl04g00637 626 SUPERFAMILY L domain-like 33 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00637 Eupl-Chr4 9713816 9720717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00637 26 626 Receptor kinase-like Gene Family AT5G16000 66.721 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Eupl04g00637 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00637 - - nnu:104593152 1076.62