Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00631 ATGAAGAAAGCACACCTATCTCTACCTCTTCTCTTCCTTCTGATCTTGTTTCTACTAGTAGAAACAACATTAGGTGAGCCAAGAACTCAAACTGTGAAAATCATGTGCGGGAACCAACGAGAGCACAACTCCACCATCTTTGTACCCAACTTCGTTGCTACAATGGAGAACATCAGTGAGCAGATGCGAACCACTGGTTTTGGAAGAGCGATTGTCGGCTCAGGACCCGACACAAACTATGGCTACGCTCAATGTTACGGAGACCTCTCCTTGCTTGATTGCGTACTATGCTATGCTGAGGCACGTACAGTCCTCCCCCAGTGCTTCCCATATAATGGGGGAAGAATCTTCCTTGATGGTTGCTTCATGCGCGCAGAGAATTATAGCTTCTTTGAAGAGTTTACAGGTCCTGATGACAAGGCCTTGTGTGGGAATGCAACCCAAAAGGGTCCAAGGTTCCGGGAATCGGCAAGGCGGGCTGTGTTGGATGCTGTTGCAACAGCACCTAACAACAACGGCTATGCAAGGGCTGAAGTACCGGTATCAGGATCAGCAAATGAGTCGGCTTATGTGTTGGCAGATTGCTGGAAAACATTGAATGCAAGCTCTTGTAAAGCGTGCTTGGAAAATGCGTCAGCCTCGGTAATGGGATGCTTTCCATGGTCGGAGGGGCGAGCACTGAACACAGGGTGCTTCTTGAGGTATTCTGACATAGATTTCCTGAACAAGGAGCAGAGTGATGGACGTTCAAAAGCGAGCATAATAGTGATGGTGGTCGCCATTGTGAGTTCTGTGGCTGTTGTGGTGATTGGGATCACTATTGGAGTCTATATTTGGAAGAAAAGAATGATAGAAAAGAAAAGAAGAGGCTCAAACGATGCGCTGAAAATGGTGAAGACCCTTTATAACAGTAGCTTGAATTTCAAGTACGCGACACTTGTGAAGGCCACTGGATCTTTTGACAATGCCAACAAACTTGGGCAAGGAGGATTTGGGACAGTTTACAAGGGAGTTTTGGCTGATGGAAGAGAAGTTGCTGTGAAGAGGCTTTTCTTTAACAATAGACACAGAGCTGCAGATTTCTACAATGAAGTTAACATGATAAGCAGTGTGGAGCACAAGAATCTGGTCAGGTTGTTGGGTTGCAGTTGTTCGGGGCCTGAAAGCCTTCTCGTCTATGAATTCCTCCCAAACAAGAGTCTTGATCGCTTCCTCTTCGATCAAAACAGAGGAAGAGCACTGACCTGGGAGAAGAGATTTGAGATAATTATCGGGACAGCGGAAGGTTTGGTCTACCTTCACGAGAACTCAAACATCAGAATCATTCACAGAGATATAAAATCCAGCAACATCCTGTTGGATTCAAAGCTCCGAGCTAAAATTGCTGATTTTGGGTTGGCAAGGTCTTTCCAAGATGATAAAAGCCACATCAGCACCGCCATTGCCGGAACTCTAGGATATATGGCTCCTGAGTACCTAGCTCATGGTCAATTAACTGAAAAGGCAGATGTCTACAGCTTTGGGGTGCTTTTGTTAGAGATTGTTACTGGAAGGCAGAACAACAGGAGCAAAACCTGCGACTACACGGACAGTCTCATCACAGCTGCATGGAAGCGTTTCCAATTGAGGACAGTGGAGGAACTTTTTGACCCAAATTTAACGACGCATAACAGTGCGATTAACAGCAACATGAAGCAAGAGATTTTGAGGGTGGTGCACGTGGGACTTCTGTGCACACAAGAGGTCCCCTCATTACGACCATCGATGTCAAGGGCCCTCAAAATGATGTCAAAGAAGGACGAAGAACTTCCTGCACCCACCAATCCACCTTTTATTGACGAGAAAACCATGGAACTCAGTGACCCATGCGAGGACCCATGCCAGCCGCTCAATGCCACTTCTTCCCCTTCAGTTGCCACCGCTTCCAACAGCTCCTTCTACCCCAGGTGA 1950 0.4677 MKKAHLSLPLLFLLILFLLVETTLGEPRTQTVKIMCGNQREHNSTIFVPNFVATMENISEQMRTTGFGRAIVGSGPDTNYGYAQCYGDLSLLDCVLCYAEARTVLPQCFPYNGGRIFLDGCFMRAENYSFFEEFTGPDDKALCGNATQKGPRFRESARRAVLDAVATAPNNNGYARAEVPVSGSANESAYVLADCWKTLNASSCKACLENASASVMGCFPWSEGRALNTGCFLRYSDIDFLNKEQSDGRSKASIIVMVVAIVSSVAVVVIGITIGVYIWKKRMIEKKRRGSNDALKMVKTLYNSSLNFKYATLVKATGSFDNANKLGQGGFGTVYKGVLADGREVAVKRLFFNNRHRAADFYNEVNMISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFLFDQNRGRALTWEKRFEIIIGTAEGLVYLHENSNIRIIHRDIKSSNILLDSKLRAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKTCDYTDSLITAAWKRFQLRTVEELFDPNLTTHNSAINSNMKQEILRVVHVGLLCTQEVPSLRPSMSRALKMMSKKDEELPAPTNPPFIDEKTMELSDPCEDPCQPLNATSSPSVATASNSSFYPR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00631 649 ProSiteProfiles Gnk2-homologous domain profile. 135 240 IPR002902 -
Eupl04g00631 649 ProSiteProfiles Protein kinase domain profile. 320 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00631 649 SUPERFAMILY Protein kinase-like (PK-like) 304 620 IPR011009 -
Eupl04g00631 649 Gene3D - 141 240 IPR038408 -
Eupl04g00631 649 Gene3D - 28 130 IPR038408 -
Eupl04g00631 649 CDD STKc_IRAK 326 598 - -
Eupl04g00631 649 MobiDBLite consensus disorder prediction 597 649 - -
Eupl04g00631 649 SMART serkin_6 320 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00631 649 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Eupl04g00631 649 FunFam Cysteine-rich receptor-like protein kinase 2 29 130 - -
Eupl04g00631 649 FunFam Cysteine-rich receptor-like protein kinase 3 139 240 - -
Eupl04g00631 649 FunFam Putative DUF26-domain receptor-like protein kinase family protein 290 395 - -
Eupl04g00631 649 Pfam Protein tyrosine and serine/threonine kinase 323 591 IPR001245 GO:0004672|GO:0006468
Eupl04g00631 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Eupl04g00631 649 Gene3D Phosphorylase Kinase; domain 1 280 395 - -
Eupl04g00631 649 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 80 620 - -
Eupl04g00631 649 Pfam Salt stress response/antifungal 42 128 IPR002902 -
Eupl04g00631 649 Pfam Salt stress response/antifungal 150 237 IPR002902 -
Eupl04g00631 649 MobiDBLite consensus disorder prediction 627 649 - -
Eupl04g00631 649 Gene3D Transferase(Phosphotransferase) domain 1 396 607 - -
Eupl04g00631 649 ProSiteProfiles Gnk2-homologous domain profile. 29 130 IPR002902 -
Eupl04g00631 649 FunFam Cysteine-rich receptor-like protein kinase 2 396 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00631 Eupl-Chr4 9589017 9595638 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00631 6 649 Receptor kinase-like Gene Family AT1G70520 66.977 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl04g00631 PK_Tyr_Ser-Thr 9.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00631 - - nnu:104593147 1035.79