Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00614 ATGAGTTTCCGGTCATACCTGTCTTCCACATTGCTCTTTCTAGCAATCACCACCACCATCTTCTCCACAAATGTAAGAGCTCATGCAGGAATTAGCCAATTATGTAAGCAAACCGACTACCCAGCACTTTGCAAGTCGGTCGTGAAGTTGGCAGCGCATGGAGGTGCAAAGGATGCAACCCAATCGGCCATCCACGCCACCATTCTCCAGACCAAGCAAGCAATGTCTATGATCGACAAGCTCATGAAATCTCAAGATGCCCTCGGAAGGGCAAACCTCAAGGTGTGCAAGGAGGTCTATGATGACGCAATAAGCAACCTTGTGACCGCGATGAAGAACCTGAAAGACAAATCTGACGCTGACTTGAAGATCAACCTCTCTGCTGTTATCTCTGATTTCTGCACTTGTGACGATGGCTTCACGGAGACACCAGGTGTTACCTCTCCTCTTGGGAAGGTCAGTACACTCCTGCAACAGCTTGCAAGCAACAGCTTGGCATTGGCAACTGAAGTTAAAAACTAG 522 0.4828 MSFRSYLSSTLLFLAITTTIFSTNVRAHAGISQLCKQTDYPALCKSVVKLAAHGGAKDATQSAIHATILQTKQAMSMIDKLMKSQDALGRANLKVCKEVYDDAISNLVTAMKNLKDKSDADLKINLSAVISDFCTCDDGFTETPGVTSPLGKVSTLLQQLASNSLALATEVKN* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00614 173 SMART PMEI_2 26 167 IPR006501 GO:0004857
Eupl04g00614 173 Pfam Plant invertase/pectin methylesterase inhibitor 31 167 IPR006501 GO:0004857
Eupl04g00614 173 CDD PMEI-like_2 29 171 - -
Eupl04g00614 173 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 168 - -
Eupl04g00614 173 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 169 IPR035513 -
Eupl04g00614 173 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 171 IPR035513 -
Eupl04g00614 173 NCBIfam pectinesterase inhibitor domain 1 169 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00614 Eupl-Chr4 9384935 9385924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00614 31 171 Carbohydrate Esterase AT4G15980 28.302 8.74e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00614 - - msin:131228175 131.724