Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl04g00561 | ATGGCTCTGCCTCTATTGAATCTACCTCGCCTCAGCCCTTCTTTCCCCCATAGACAACCACTCTTTCTCCTTCCTCACAGGAGACCCCAGTTCACCACCAACACTAATTTTCGATCCTCTCCTCTCGTTACGCTGATTAACACCAGAGGCAATTCATTTTCTATTCCAAAATCGGCCTCCATTGATGGATTCTCCGTGCAAAACCTCCAGGGAGAGAGTGATGGTGGAGAGAACAATGTTGGGTTTATGGAGAGGTTATATAGGTGGATTGTTTTTCTTCGATCGGTTGCACCGGGTGGAAGTTGGTGGAGGTTCCCTGATCAAGTCCAAGGAGTTGTCATCGCGAAACCAGTGACAGTGTTCTTCGCACTTCGTCGAATGTGGGAGTTAGTTGCTAACGATAGATGGGTTATCTTCGCTGCATTTGCTGCCCTAATTCTCGCAGCGCTTTCGGAGATCTCAATACCACATTTCTTGGCAGCATCTATTTTTTCTGCACAGAGTGGTGAGACCGTGGTGTTCCATAGGAATGCGCGGCTCTTGGTTCTGTTGTGTTTTACTTCAGGAATATGCAGTGGTGTACGGGGTTGCTGTTTTAGCATTGCAAATATGATCCTGGTTAAGCGCATGAGGGAAGTGTTTTATTCAGCTCTTCTCTTTCAGGATATATCCTTTTTCGATACAGAAACTGTGGGCGATTTGACAAGTAGGCTGGGTTCAGATTGTCAGCAAGTATCTCGTGTTATTGGAAATGATCTTAATATGATATTACGCAATGTTCTTCAGGGTACAGGTGCATTGATCTATTTGTTTATTTTGTCGTGGCCTCTTGCATTATCTTCATTGGCAATATGCTCCACCCTATCAACAATCATGCTGTTTTATGGCCAGTACCAGAAGAAAGCCGCAAAATTAACCCAAGAATCCACTGCTTGTGCCAACGAGGTTGCGCAAGAAACATTTTCATTGATGAGAACTGTCCGAGTGTATGGAACAGAGAAACAAGAACTTGGAAGATACAAACAATGGCTGAATAAATTAGCTGATATAAGCTTGCGACAGAGTGTGGCTTATGGATTTTGGAGTCTGAGCTTCAACACCCTTTATCATTCAACACAGGTTATTGCTGTGCTGGTAGGAGGAACGTCAATTATGGCTGGTCATATAACGGCAGAGCAACTCACAAAGTTTATATTGTACTGCGAGTGGTTGATTTATGCAACATGGTGGGTCGGAGACAATTTGTCATCTTTAATGCAGTCTGTTGGGGCAAGTGAAAAGGTCTTCCAATTGATGGATCTCTTGCCCAGTGACCAATTCTTATCAGAAGGAGTGAAATTGCAAAGGCTGATGGGAAATATTGAGTTTGTGAATGTGTCTTTTCATTATCCTGCAAGGGCAACGGTACCTGTTCTGCAACAAGTAAACATGTCAATACACCCAAATGAAGTGGTTGCAATCGTTGGTCTTAGCGGTAGTGGGAAAAGCACATTAGTTAATCTTCTGCTTCGTCTGTATGAACCAACAGACGGTCAGATACTAATTGATGGCTTCCCTCTGAAAGACTTGGACGTCAAGTGGCTTAGAGAAAGAATTGGATTTGTGGGACAGGAACCCCGTCTTTTCCGAATGGATGTCAGTTCAAACATAAGATACGGATGCACCCGAGATATCAATCAGGAAGATGTCGAATGGGCTGCTAAGCAGGCATATGCTCATGACTTTATCTTGTCTCTACCCAATGGTTATGAAACCCTAGTTGACGATGATCTGCTCAGTGGAGGACAAAAGCAGCGGATCGCCATTGCAAGGGCCATTCTTAGGGACCCTTCTATTTTGATCCTTGATGAAGCTACCAGTGCACTGGATGCGGAGAGTGAACACAATATCAAGGGGGTTCTTCGAGCTGTAGGAAACAGCTCCCAGACAAAGAGAGCTGTCATTGTCATTGCGCATAGGCTATCAACAATACAAGCTGCTGACCGGATAGTAGTAATGAATGGTGGTAGAATTGTTGAGATGGGTGTGCACATGGAGCTTCAACGGAAGGATGGCTTGTATGCAAGATTAACCAAAAGACAGGCTGATGCCTTGGCATGA | 2100 | 0.4443 | MALPLLNLPRLSPSFPHRQPLFLLPHRRPQFTTNTNFRSSPLVTLINTRGNSFSIPKSASIDGFSVQNLQGESDGGENNVGFMERLYRWIVFLRSVAPGGSWWRFPDQVQGVVIAKPVTVFFALRRMWELVANDRWVIFAAFAALILAALSEISIPHFLAASIFSAQSGETVVFHRNARLLVLLCFTSGICSGVRGCCFSIANMILVKRMREVFYSALLFQDISFFDTETVGDLTSRLGSDCQQVSRVIGNDLNMILRNVLQGTGALIYLFILSWPLALSSLAICSTLSTIMLFYGQYQKKAAKLTQESTACANEVAQETFSLMRTVRVYGTEKQELGRYKQWLNKLADISLRQSVAYGFWSLSFNTLYHSTQVIAVLVGGTSIMAGHITAEQLTKFILYCEWLIYATWWVGDNLSSLMQSVGASEKVFQLMDLLPSDQFLSEGVKLQRLMGNIEFVNVSFHYPARATVPVLQQVNMSIHPNEVVAIVGLSGSGKSTLVNLLLRLYEPTDGQILIDGFPLKDLDVKWLRERIGFVGQEPRLFRMDVSSNIRYGCTRDINQEDVEWAAKQAYAHDFILSLPNGYETLVDDDLLSGGQKQRIAIARAILRDPSILILDEATSALDAESEHNIKGVLRAVGNSSQTKRAVIVIAHRLSTIQAADRIVVMNGGRIVEMGVHMELQRKDGLYARLTKRQADALA* | 700 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl04g00561 | 699 | CDD | ABC_6TM_TAP | 151 | 428 | - | - | |
Eupl04g00561 | 699 | PIRSF | ABC_prm/ATPase_B | 78 | 699 | - | - | |
Eupl04g00561 | 699 | SMART | AAA_5 | 481 | 670 | IPR003593 | GO:0016887 | |
Eupl04g00561 | 699 | Pfam | ABC transporter | 472 | 620 | IPR003439 | GO:0005524 | |
Eupl04g00561 | 699 | FunFam | ABC transporter B family member 26, chloroplastic | 120 | 439 | - | - | |
Eupl04g00561 | 699 | Pfam | ABC transporter transmembrane region | 139 | 405 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Eupl04g00561 | 699 | SUPERFAMILY | ABC transporter transmembrane region | 125 | 438 | IPR036640 | GO:0005524|GO:0016020 | |
Eupl04g00561 | 699 | PANTHER | ABC TRANSPORTER B FAMILY | 131 | 691 | IPR039421 | - | |
Eupl04g00561 | 699 | FunFam | Multidrug ABC transporter ATP-binding protein | 446 | 698 | - | - | |
Eupl04g00561 | 699 | ProSitePatterns | ABC transporters family signature. | 592 | 606 | IPR017871 | GO:0005524|GO:0016887 | |
Eupl04g00561 | 699 | Gene3D | - | 444 | 698 | IPR027417 | - | |
Eupl04g00561 | 699 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 139 | 420 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Eupl04g00561 | 699 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 446 | 694 | IPR027417 | - | |
Eupl04g00561 | 699 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 454 | 693 | IPR003439 | GO:0005524 | |
Eupl04g00561 | 699 | Gene3D | ABC transporter type 1, transmembrane domain | 121 | 438 | IPR036640 | GO:0005524|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl04g00561 | Eupl-Chr4 | 8650230 | 8677562 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl04g00561 | 209 | 697 | Calmodulin-binding Proteins | AT2G36910 | 35.141 | 3.47e-76 | 265 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl04g00561 | - | - | nnu:104593098 | 1094.72 |