Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00557 ATGGCTGCAACTTCGGGATTGTCGGCAACGACCTCCCGGAAAAATCTGTGTGCACAATCGAGTTACGATGTGGCAGTGCCCGTGCCGAATTGCTCGAGGGAATCACTTGGTGGTGATGGAGTAGGTTGTTTGTCAAAGCCTCCAGATTCTGAGTCTGATTCTGCTGCTAACTGTAACTCATCTTCTGCGTTGGGGAGTTCTCACCCCCTTCTGCGAAAACCTGGGAAACAGTCCTCAAGTGAAGGAGTCTCCTCTGCTTCCTATACAATTGCTCCAGATCATGGTATGAAGAGTGTGGGCTATCGACCGGCTCCTGTAATCAATCAGAAGCCTTCTCACAAGGCTTCTGTAATCAATCAGAAGCATTCCCAAAAGACGGTCCATGACCATTTACAAAAGCAAGAACTACCCAGTTCGTTGAAGAAATCTTGTAAATCAAACAAGGGGCAATCGGTAGTTGTAGGCTCAAGCAATCATCCTGGTAAAATGGCAGGTACAGCTTCTCTAGAGCAACAATTAACAGAAGGAGCTCCAGAAGATCTTGTGTCAAGTTTGGTTCTTGAAGAGTTACCTGAAACCTGCTTCAAACATCCCATTGATGGCTCTGAGACTGGTAATTCAAATTGCTTGTCGAAGCCAGCAGATTTTGTTTCTGGCACCTGTAAAGAATTTTTTGGGCAACAGGACAGCCAATCAACATCTCAATGTTCGATCAGCCATAATCAGAGTCCTCCTGACAGTATTTACACTGTAACCCAATATGCAGAAGCTAAGGATAGCTTCGGCACCACAGGAGTTAGCGATTGTGCCAGCAGTGTCGCTAAGTCCAGTGGAAGTGCCAAAGTTAGCAACTCTTGTGATTTTGTGGAGAGCAGGAAGACTAGTATCTGCAGAGGTAGCACTGGCAGTGATGTCAGTGATGAGAGCAGCTCGAGTAGCTTTAGCAGTTCTGTTAACAAACCCCACAAGGCGAATGATACAAGATGGGAAGCGATTCAAGCTGTCCGAGCTCGAGATGGGATGCTGGGGTTGAACCATTTCAGGCTTTTGAGGAGGTTGGGCTGTGGAGATATAGGTAGTGTTTACCTATCTGAGTTGAGTGGGACTAGAAGCTATTTTGCCATGAAGGTTATGGACAAAGCAGCTCTAGCGAGTCGTAAGAAGCTTCTGAGGGCTCAGACAGAAAGAGAGATATTGCAGTCTCTGGATCATCCATTCTTGCCCACTTTGTATTCGCATTTTGAGACTGAGAAGTTCTCTTGCTTGGTCATGGAGTTTTGCCCTGGGGGAGACCTACATGCACTACGGCAAAGACAACCGGGGAAGCATTTTCCCGAACATGCTGCTAGGTTCTATGTGGCAGAGGTTCTCCTTGCCATGGAGTACCTACACATGCTTGGGATCATCTACAGAGACCTTAAACCAGAAAATGTGTTAGTGAGGGATGATGGCCATATAATGCTCTCAGATTTTGACCTCTCTCTAAGGTGTGCCGTCTGCCCAACTCTGGTGAGGTCCTCAAACACAGACGTGGACTCATCAAAGAAGAACTCCACGTACTGCGTTCGGCCTGTTTGCATCGAGCCCTCTTGTATAATCCAGCCATCTTGCATTCAACCCTCATGTTTTGGGCCTCGCTTCTTATCAAGCAAATCCAAGAAAGAAAAGAAAGCCAAACCAAAGAATGAAGTCTATAATCAAGTGAGCCCACTTCCTGAGCTCATTGCAGAACCTACAAGTGCTCGATCAATGTCTTTCGTGGGTACCCATGAGTACTTGGCTCCGGAAATCATCAAAGGTGAAGGCCATGGCAGCGCTGTAGATTGGTGGACGTTCGGGATCTTTCTCTATGAACTTTTGTTTGGGAAGACCCCATTCAAGGGGTCAGGAAATCGTGCTACTTTGTTCAATGTGGTAGGGCAACCCCTCAGATTCCCCGAGTCACCTTCTGTGAGCTTCGCTGCAAGGGACTTGATCAGAGGTTTGCTTGTGAAAGAGCCTCAGCATCGCCTTGCGTATAGGCGTGGGGCCACAGAAATTAAACAACATCCATTCTTTCAGAGTGTGAATTGGGCACTTATCCGGTGCACTAATCCACCGGATGTGCCGAAGCCATTCATAATGGACTCTGCAATAACAGATGTGCCTGCAGCGCCGAAAAATGAGAATGTGTCGGGGGTTGATGTAAAGCCTTCAGGTAATTATTTGGAGATTGATTTCTTTTAA 2226 0.4695 MAATSGLSATTSRKNLCAQSSYDVAVPVPNCSRESLGGDGVGCLSKPPDSESDSAANCNSSSALGSSHPLLRKPGKQSSSEGVSSASYTIAPDHGMKSVGYRPAPVINQKPSHKASVINQKHSQKTVHDHLQKQELPSSLKKSCKSNKGQSVVVGSSNHPGKMAGTASLEQQLTEGAPEDLVSSLVLEELPETCFKHPIDGSETGNSNCLSKPADFVSGTCKEFFGQQDSQSTSQCSISHNQSPPDSIYTVTQYAEAKDSFGTTGVSDCASSVAKSSGSAKVSNSCDFVESRKTSICRGSTGSDVSDESSSSSFSSSVNKPHKANDTRWEAIQAVRARDGMLGLNHFRLLRRLGCGDIGSVYLSELSGTRSYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYSHFETEKFSCLVMEFCPGGDLHALRQRQPGKHFPEHAARFYVAEVLLAMEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVCPTLVRSSNTDVDSSKKNSTYCVRPVCIEPSCIIQPSCIQPSCFGPRFLSSKSKKEKKAKPKNEVYNQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCTNPPDVPKPFIMDSAITDVPAAPKNENVSGVDVKPSGNYLEIDFF* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00557 741 Gene3D Phosphorylase Kinase; domain 1 345 430 - -
Eupl04g00557 741 Pfam Protein kinase domain 348 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00557 741 Pfam Protein kinase domain 583 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00557 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Eupl04g00557 741 CDD STKc_phototropin_like 346 705 - -
Eupl04g00557 741 SMART serkin_6 347 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00557 741 MobiDBLite consensus disorder prediction 36 164 - -
Eupl04g00557 741 FunFam serine/threonine-protein kinase D6PK-like 431 498 - -
Eupl04g00557 741 Gene3D Transferase(Phosphotransferase) domain 1 431 497 - -
Eupl04g00557 741 PANTHER FLIPPASE KINASE 1-RELATED 132 705 - -
Eupl04g00557 741 MobiDBLite consensus disorder prediction 50 87 - -
Eupl04g00557 741 MobiDBLite consensus disorder prediction 137 164 - -
Eupl04g00557 741 SUPERFAMILY Protein kinase-like (PK-like) 322 715 IPR011009 -
Eupl04g00557 741 ProSiteProfiles Protein kinase domain profile. 347 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00557 741 Gene3D Transferase(Phosphotransferase) domain 1 581 703 - -
Eupl04g00557 741 FunFam Serine/threonine-protein kinase D6PK-like 345 430 - -
Eupl04g00557 741 MobiDBLite consensus disorder prediction 296 322 - -
Eupl04g00557 741 FunFam serine/threonine-protein kinase D6PK-like 581 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00557 Eupl-Chr4 8559539 8564453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00557 254 741 AGC Kinase Gene Family AT5G47750 75.254 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl04g00557 Pkinase 9.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00557 K08286 - nnu:104593092 953.74