Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00550 ATGGTCGGAACTTCTCTAGAGTCCAACGACGTTACCGTCAAAAGCAGCAACACCATTAAGTTCCTCTGTAGCTACGGCGGAAAGATCCTCCCCCGTTATCCCGACGGCAAGCTTCGTTACGTTGGTGGAGAGACCAGAGTTCTCGCTGTTGATCGATCCGTCTCGTTTCCAGAGCTTTTATTGAAGCTTGGAGAGTTGTGTGGATCGTCGGTGAGTCTAAGGTGTCAGTTGCCGACAGAAGATCTAGACGCTTTGGTTTCGATCACCTCCGATGAAGATCTCGCCAATCTCATCGAAGAGTATGATCGAGCAAGCCAAGCGGCATCAACTTCATTAAAGATCAGAGCTTTTCTTTCGCCTCCGAAATCGATCAAAAAAATCTCTCCTCCTCAATCGGTCACCTCCTTCGTCGTCGATTCCGCTGCAGGGAAATACTCCTCGGCAGCCGGGGGATCTAAGACATCGATACTTCCAGTCATGGCGGCCGATCGATGCGTCCGTCAGATCTCAACACCGGTGGGATTTCCCGTCTGCTTCGAGAAATCCGCCGGGACAAAGCAACGTTACTACGCCTGCGTTCCTCAGGGAAACCCTAGGCATATCTACCTTGTACACAACGGGAACCACTGGCAATAA 636 0.511 MVGTSLESNDVTVKSSNTIKFLCSYGGKILPRYPDGKLRYVGGETRVLAVDRSVSFPELLLKLGELCGSSVSLRCQLPTEDLDALVSITSDEDLANLIEEYDRASQAASTSLKIRAFLSPPKSIKKISPPQSVTSFVVDSAAGKYSSAAGGSKTSILPVMAADRCVRQISTPVGFPVCFEKSAGTKQRYYACVPQGNPRHIYLVHNGNHWQ* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00550 211 PANTHER OS05G0427100 PROTEIN-RELATED 15 140 - -
Eupl04g00550 211 SMART PB1_new 33 119 IPR000270 GO:0005515
Eupl04g00550 211 SUPERFAMILY CAD & PB1 domains 35 128 - -
Eupl04g00550 211 CDD PB1_UP2 22 118 - -
Eupl04g00550 211 Pfam PB1 domain 35 110 IPR000270 GO:0005515
Eupl04g00550 211 Gene3D - 37 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00550 Eupl-Chr4 8478757 8484246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00550 19 120 MAP Kinase Kinase Kinase AT5G57610 51.456 6.56e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00550 - - nnu:104593086 295.434