Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00532 ATGGCAAGGACTTGGCTTATTGATAGTAGGGGTATTGCAAGGAAAGTAAAAAATGCCACTCGATCCTCTACATATCAAATCAAAGACTGGGGGGCAAATCGTGAATGCCCTAATTGCCATCATCTTATTGATAATAGTGATGTTTCGCTTGAATGGCCGGGCCTGCCTGCTGGTGTGAAGTTCGATCCATCTGATGTGGAGCTTTTGGAACATTTGGCGGGAAAGGTTGGGCTGGGAAATTCAAAGCCCCATTTGTTTATCGATGAGTTCATCCCAACACTTGAGGGGGGCGAAGGAATCTGTTATACCCATCCCGAGAATCTTCCTGGTGCCAAGAAAGATGGAAACAGCATCCATTTCTTCCATAGAACAGCCAAAGCATATGCAACTGGTCATCGCAAGCGCCGCAAGATCCATGGTCAACATAGTTTGACAGATGAGCATGTCCGCTGGCATAAGACAGGTAAAACCAAGGATGTGATGGAGAATGGGGTTCAAAAGGGCTGTAAGAAGATCATGGTTCTTTATCGAAGTTCAAAAAAGGGGTCCAAGCCAGATAAGTCCAACTGGGTGATGCATCAGTACCATCTGGGGACAGAAAAAGATGAAAATGAAGGTGAATTTGTGGTTTCAAAGATTTTCTACCAACAGCAGTCAAAGCAGACTGACAAGAGCGATACTGATCCAATCATTGAAGAACCTGGTATAGTTACAGTCCAAGCTAGTCCAAGCACCCCAAAGACAAATACCCCCAATCCACGTCGACTGGGCAGGTTTGCTTTATACAACGAGGTTGACGAAGACAATGTACACCACTCACCTGCCCAGGATGCAGAGGTTGTCTTGGAAGAACCTGAACCCCTGACGTCAGCTGTTCATCTCGAGGATGAGAGAGTGGACCCTGTATGGTGGGCAGGCGAATCTCAGGCTGTCGAGGACCTGGATCCTAACGGCATAGATGCCTCATTGTTATGCAATGAGATCCTCGATTCTTATGCTCCTATTGATGAATCAGAACTAAAACACACACCTCATTCGTCGGACTATGGTCGCAGCAGGAGTGACCCACTCGAAGGAGATATCAACAGAGCCTGTGGGATCTCTGACCTTGATAATTTAGAACTTGAAACACCGCCAGATTTTCAGCTTGCAGATTTGCAGTTTGGTTCTGATGAAAGCATTATGGCTTGGCTAGACCGGTTATAG 1206 0.4627 MARTWLIDSRGIARKVKNATRSSTYQIKDWGANRECPNCHHLIDNSDVSLEWPGLPAGVKFDPSDVELLEHLAGKVGLGNSKPHLFIDEFIPTLEGGEGICYTHPENLPGAKKDGNSIHFFHRTAKAYATGHRKRRKIHGQHSLTDEHVRWHKTGKTKDVMENGVQKGCKKIMVLYRSSKKGSKPDKSNWVMHQYHLGTEKDENEGEFVVSKIFYQQQSKQTDKSDTDPIIEEPGIVTVQASPSTPKTNTPNPRRLGRFALYNEVDEDNVHHSPAQDAEVVLEEPEPLTSAVHLEDERVDPVWWAGESQAVEDLDPNGIDASLLCNEILDSYAPIDESELKHTPHSSDYGRSRSDPLEGDINRACGISDLDNLELETPPDFQLADLQFGSDESIMAWLDRL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00532 401 MobiDBLite consensus disorder prediction 336 358 - -
Eupl04g00532 401 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 271 IPR044799 GO:0003700
Eupl04g00532 401 Gene3D NAC domain 64 222 IPR036093 GO:0003677|GO:0006355
Eupl04g00532 401 SUPERFAMILY NAC domain 40 216 IPR036093 GO:0003677|GO:0006355
Eupl04g00532 401 MobiDBLite consensus disorder prediction 336 360 - -
Eupl04g00532 401 FunFam NAC domain-containing protein 8 64 220 - -
Eupl04g00532 401 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
Eupl04g00532 401 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00532 Eupl-Chr4 8289836 8297366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00532 32 225 NAC Transcription Factor Family AT4G28500 56.122 2.10e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl04g00532 NAM 6.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00532 - - ming:122079019 569.311