Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00518 ATGGCTGGAGATTGTTCGTCCGAACAAGACCCGGACGATTCTGATTCGGAGTTCGTGGAGGTCGATCCAACAGGTCGATATGGTCGGTATAAAGAGGTGTTAGGAAAGGGGGCATTCAAAACAGTCTATAGAGCTTTTGATGAATTGGAAGGCATAGAAGTAGCCTGGAATCAGGTTAAGGTGGCTGATGTCTTGCGCAATTCAGAAGACTTGGAGCGTCTATACTCCGAAGTCCATTTGCTCAAGACTCTGAAGCACAAGAACATAATCAAGTTTTACAACTCATGGGTTGACACCAAATATGATAAAATCAACTTCATCACTGAGATTTTCACTTCCGGGACATTGCGCCAGTACCGTAAAAAACACAAGCACGTGGATTTGAGAGCATTGAAGAATTGGTCAAGGCAGATCTTGCAGGGTCTTCTGTATCTCCACAGTCACGACCCACCAGTTATTCATCGGGACTTGAAGTGTGATAACATCTTTGTTAATGGGAACCAAGGTGAAGTGAAAATTGGCGATCTTGGACTAGCTGCCATTCTTCAGAAGGCTCGTTCAGCTCATAGTGTCATTGGGACCCCGGAGTTCATGGCGCCAGAACTTTATGAGGAGGAATACAATGAGCTTGTAGATATCTATGCCTTCGGTATGTGCTTATTGGAGTTAGTGACCTTTGAATACCCCTATGTTGAATGCGCCAATGCAGCTCAAATATACAAGAAAGTGACATCTGGAATCAAGCCTGCATCATTGAGTAAGGTGAAGGATCCTGGAGTGAGAAAATTTATAGAAAAATGTATTGCAAATGCCTCTGTGAGATTGCCGGCCGAAGAGCTGTTAATGGATCCTTTTCTCCAATCAGATGGGGAGAATGAAAGTGTAGGTCGTTCGTTACGACAAAATCCCAATCATTCAGCAAATGCAGATGTTAGCAGTGAGCAGTTTGTTATTGGAGCCAATTCTTTAAGTACTAAGGATGGGGCAAGTCGAGACATCATGGTGGAAGGTCAAAGGAAAGACATCAACACAATTTTTTTAAAACTACGGATTGCAGATTCCACAGGTCACGTGCGCAACATCCACTTTCCATTTGATATTGAGGCGGATACAGCAATAAATGTTGCTAGTGAAATGGTTTCAGAGTTGCACCTTACAGATCAAGATGTTACAACTATCGCTGCTATGATTGACTCGGAAATACGGACACATATTCCAGAGTGGTCATACACAAAATCTATGGAAGATAATTCTGGTGACGAGGTTGCAATGTCAGATGACTCTGAAACTAAAGATGAGCCATCTCCGTTGGCAAGTGACACTGATCCTCCTTCGGGTGGTTTAGTTCTGGAACGACTACCTTCAGGTCGGAAGTATTGGTCCGACTCCCCCAGGGGAGGCAGAGGCTCCCCCGTGAGGCCTTTCCAATCAAACCCGTCTTCTCAATTGGATTCAGTTTTTAGTAGTGATTGTTTGGCTGAAGATGATGAGGAATCACCTGGACATTATCCAAATGCTGTTACTTCACGTAATCAGCTAGAAGATCTTGCAATCCTGATGCCTAGAAGCAAAGAGAACGTGGAAATTGGTGCCTCGTCTGTGGGATCTGAATGGCACAGTGAATTTCCGGATGATAAGGTTCATGAGAAAAAGAAAGAAGTTGGTGTGCCTAAGGATTCTCAAATTTGTGATAATCAAAATGGGGGAGTTGCATTTCAGCATGACAGCAATGGTGCAGTGTCACTGGGGGAGTACTGTAAAATGTTGATCGGCCATGAGGCAAAAGATCTCAGAATTATTGTGGAGAAATTAGAGCATCTGTTGGTAGAGCAGCAAAAGGAGCTCAACGAACTAAAGATGAAGCATGAACTGGCGATAGCAGATCTTTTGAAGGAACTGCCTCCAGAAACTTACTATAGAGTTTTCAATATGTGTCACTTAAAGGTTCCTGATTATAGGATGTTTAGTCAGTCGCATTGGTACTCTGGGCATTCCACAGATTCTGACTCCTCCTTACAAGTGGAAACATTGTTACCTCACATGTCCAACTCTCCCGTGGATAACAATTTGAATGATTCTTCAATTCCACCTATTGCCAACAATCTTTCTCAGCCTAAGAGGGTTATAGATTTGTCAGGAACCCCAAACAGTGTTCGTATTGTTGGGAAAGTTGGGAAGCAAGAGTATTCAGCTGAAAATAATGCTGCTGGACCTGGCTTTAAAGATAGGTCAAGTTTGTTGAAGGGGGATCCCAAATCTTCTAGTATGGGTATTGCTGTAATCTTGGGAGAGAATGTTGCCAAATCATAG 2310 0.4325 MAGDCSSEQDPDDSDSEFVEVDPTGRYGRYKEVLGKGAFKTVYRAFDELEGIEVAWNQVKVADVLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKYDKINFITEIFTSGTLRQYRKKHKHVDLRALKNWSRQILQGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQKARSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYVECANAAQIYKKVTSGIKPASLSKVKDPGVRKFIEKCIANASVRLPAEELLMDPFLQSDGENESVGRSLRQNPNHSANADVSSEQFVIGANSLSTKDGASRDIMVEGQRKDINTIFLKLRIADSTGHVRNIHFPFDIEADTAINVASEMVSELHLTDQDVTTIAAMIDSEIRTHIPEWSYTKSMEDNSGDEVAMSDDSETKDEPSPLASDTDPPSGGLVLERLPSGRKYWSDSPRGGRGSPVRPFQSNPSSQLDSVFSSDCLAEDDEESPGHYPNAVTSRNQLEDLAILMPRSKENVEIGASSVGSEWHSEFPDDKVHEKKKEVGVPKDSQICDNQNGGVAFQHDSNGAVSLGEYCKMLIGHEAKDLRIIVEKLEHLLVEQQKELNELKMKHELAIADLLKELPPETYYRVFNMCHLKVPDYRMFSQSHWYSGHSTDSDSSLQVETLLPHMSNSPVDNNLNDSSIPPIANNLSQPKRVIDLSGTPNSVRIVGKVGKQEYSAENNAAGPGFKDRSSLLKGDPKSSSMGIAVILGENVAKS* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00518 769 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 347 401 IPR024678 GO:0004674|GO:0005524
Eupl04g00518 769 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00518 769 Gene3D Transferase(Phosphotransferase) domain 1 111 293 - -
Eupl04g00518 769 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
Eupl04g00518 769 CDD STKc_WNK 26 286 - -
Eupl04g00518 769 MobiDBLite consensus disorder prediction 1 21 - -
Eupl04g00518 769 MobiDBLite consensus disorder prediction 733 753 - -
Eupl04g00518 769 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Eupl04g00518 769 FunFam Probable serine/threonine-protein kinase WNK3 343 435 - -
Eupl04g00518 769 Coils Coil 594 632 - -
Eupl04g00518 769 MobiDBLite consensus disorder prediction 408 486 - -
Eupl04g00518 769 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00518 769 FunFam probable serine/threonine-protein kinase WNK9 111 291 - -
Eupl04g00518 769 Gene3D - 343 432 - -
Eupl04g00518 769 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Eupl04g00518 769 Pfam Protein kinase domain 31 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00518 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Eupl04g00518 769 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00518 Eupl-Chr4 8152431 8159756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00518 16 408 MAP Kinase Kinase Kinase AT3G22420 55.251 2.13e-166 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Eupl04g00518 Pkinase 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00518 K08867 - psom:113299512 899.042