Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00503 ATGGATTCTGAATTGGTAACTGGTTTGACTGAAAGCATCAAAGATCACTTTTTTGGGCACCAACCAAATGGGATGGAAGTTCAAGTCCCACATAAGCAACCCTTTGTGATTGGTATTTCTGGTGGTACTGCATCTGGAAAGACAACTGTTTGTGATATGATTATTGCTCAGCTCCAAGATCAAAGGGTTGTTCTTGTGAATCAAGAATCGTTTTACAACACATTGAGTGATGAGAAATTAAAACGAGTTCATGAATATAACTTTGACCATCCTGATGCCTTCGACACTGAGCTGTTGCTCTCTTGTATGGAGAAATTGAAACTTGGGCAGGCAGTTGATATCCCCATCTATGACTTCAAGACGCATAAGAAGCTAACAACACGCAAGGTAAATCCATCAGACATCATAATTTTAGAAGGAATACTAGTTCTTCATGAACCTCATGTCCGCGATCTCATGAACATGAAGATTTTTGTTGATACAGATTCTGATTTGCGGTTGGCAAGGAGGATACAACGTGATACTGTTGAAAGAGGCAGAGACATTCAAGTCGTGCTTAACCAATATGCTGAATTCGTGAAGCCTGGTTTTGATGACTTCATACTTCCATCAAAGAAATACGCAGATATCATCATCCCTCGAGGAGGGGATAATGGCGTTGCAGTTGACTTGATTGTGCAGCATATTCGTACAAAACTTTGTCAGCATGATCTATGTAAAATATACCCAAATGTTTGTGTTATTCATTCGACTCTCCAGATACGTGAAATGCATACACTTATACGTGATGTTCGGACAACAAAACATGACTTTGTCTTTTATGCTGACCGACTGATTCGCCTGGTTGTGGAGCATGGTTTAGGTCACCTTCCATTTACTGAAAAGCAGATCATTACTCCAACAGGATCTGTGTATACTGGAGTGGCCTTTTGTAGAAGATTATGTGGGGTCTCAATAATTAGAAGTGGAGAAAGCATGGAGAATGCATTAAGAGCATGCTGTAAGGGGATCAAAATCGGTAAAATCCTCATCCACGGAGAACGAAACAACAGCCGGCAGCTAATCTATGAGAAGCTACCAGAGGACATTTCAGGCCGCCGTATACTATTGCTCGATCCGGTTCTTGCTACAGGAAACTCTGCAGTTGAAGCCATCTCTCTGCTGGTCAGTAAGGGCGTATTGGAGTCCAACATCATCTTCCTTAATCTTATATCATCCCCTGAAGGAATACACACAGTTTGTAAGAAGTTTCCAACACTTACGATTGTGACATCGGAGATTGACATCTCACTAGACAAGGAATTGCGTGTAATTCCAGGTATGGGGGAGTTCGGGGATCGTTACTTTGGCACAAATTGA 1359 0.415 MDSELVTGLTESIKDHFFGHQPNGMEVQVPHKQPFVIGISGGTASGKTTVCDMIIAQLQDQRVVLVNQESFYNTLSDEKLKRVHEYNFDHPDAFDTELLLSCMEKLKLGQAVDIPIYDFKTHKKLTTRKVNPSDIIILEGILVLHEPHVRDLMNMKIFVDTDSDLRLARRIQRDTVERGRDIQVVLNQYAEFVKPGFDDFILPSKKYADIIIPRGGDNGVAVDLIVQHIRTKLCQHDLCKIYPNVCVIHSTLQIREMHTLIRDVRTTKHDFVFYADRLIRLVVEHGLGHLPFTEKQIITPTGSVYTGVAFCRRLCGVSIIRSGESMENALRACCKGIKIGKILIHGERNNSRQLIYEKLPEDISGRRILLLDPVLATGNSAVEAISLLVSKGVLESNIIFLNLISSPEGIHTVCKKFPTLTIVTSEIDISLDKELRVIPGMGEFGDRYFGTN* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00503 452 Gene3D - 236 451 IPR029057 -
Eupl04g00503 452 FunFam Uridine kinase 236 451 - -
Eupl04g00503 452 CDD UMPK 36 232 IPR000764 -
Eupl04g00503 452 FunFam Uridine kinase 30 235 - -
Eupl04g00503 452 Pfam Phosphoribulokinase / Uridine kinase family 36 220 IPR006083 GO:0005524|GO:0016301
Eupl04g00503 452 NCBIfam uridine kinase 33 232 IPR000764 -
Eupl04g00503 452 CDD PRTases_typeI 314 416 IPR000836 -
Eupl04g00503 452 PRINTS Uridine kinase signature 64 75 - -
Eupl04g00503 452 PRINTS Uridine kinase signature 34 51 - -
Eupl04g00503 452 PRINTS Uridine kinase signature 109 124 - -
Eupl04g00503 452 PRINTS Uridine kinase signature 200 213 - -
Eupl04g00503 452 PRINTS Uridine kinase signature 178 189 - -
Eupl04g00503 452 PRINTS Uridine kinase signature 164 174 - -
Eupl04g00503 452 Gene3D - 30 235 IPR027417 -
Eupl04g00503 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 225 IPR027417 -
Eupl04g00503 452 PANTHER URIDINE KINASE 29 362 - -
Eupl04g00503 452 Pfam Uracil phosphoribosyltransferase 250 451 - -
Eupl04g00503 452 SUPERFAMILY PRTase-like 234 451 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00503 Eupl-Chr4 8025537 8042596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00503 13 452 PRT Gene Family AT4G26510 74.831 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00503 K00876 - mof:131168055 722.235