Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00499 ATGCATAATCTGCGTATCAACTATATGCACACCTTTTTGTTGCTTTGTCTCTTGATCAGTTTCCTTATCTGGTTTTTTGTTTCTCTGCTTGCAGATAGGATCCACAGCAAAATGGGAGAAGGCACCTTTGGTCAGGTCCTGGAATGTTGGGACAGGGAAAGAAAAGAAATGGTTGCAGTCAAAATTGTCCGCGGTATTAAGAAGTACCGTGAAGCAGCAATGATAGAAATAGATGTGCTCCAACAACTTGCAAAGCATGATAAAAGTGGCAGTCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAACCATATTTGTATTGTATTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTACGGAAAAACAATTATCGCTCGTTTCCCATTGATCTAGTTCGCGAGCTTGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGATTTGCGTCTTATCCATACCGACTTGAAGCCCGAGAACATTCTTCTTGTTTCATCGGAGTATGTAAAAATACCAGATTACAAGGTTTCATCTCGGTCACCCAAGGATGGGTCCTATTTTAAGAGACTGCCAAAGTCAAGTGCTATCAAGGTGATTGATTTTGGTAGCACAACATATGAGCATCAGGATCATAGCTACATTGTGTCAACACGGCACTACCGTGCACCTGAGGTTATTCTTGGACTTGGATGGAGTTATCCGTGTGATATATGGAGCATTGGTTGTATATTGGTGGAGCTTTGCTCGGTATGTTTCCTATCCTATAATCATATGTCAATACTCGATTTGACTTCAATTTCAAGGCAACATCATGTTTTGTTGCAGGGAGAAGCACTGTTTCAGACCCATGAGAACTTGGAGCACCTTGCCATGATGGAGAGGGTGTTAGGTCCGCTGCCTCAGCACATGTTGAAGAGAGTAGACCGGCACGCTGAGAAGTATGTGAGAAGGGGTAGATTGGACTGGCCGGAGGGTGCCACCTCAAGGGAGAGCATTAAAGCAGTTTTGAAGCTACCCCGTCTTCAGAATCTAGTGATGCAACATGTTGACCACTCAGCAGGTGATCTGATAGATCTCTTGCAAGGTCTCCTTAGGTATGATCCTTCGGACCGGCTGACAGCTCGAGAAGCTCTCAGGCACCCCTTCTTTACCAGGGATCATCACAGGAGGTCTTAA 1182 0.4416 MHNLRINYMHTFLLLCLLISFLIWFFVSLLADRIHSKMGEGTFGQVLECWDRERKEMVAVKIVRGIKKYREAAMIEIDVLQQLAKHDKSGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVRELGRQLLECVAFMHDLRLIHTDLKPENILLVSSEYVKIPDYKVSSRSPKDGSYFKRLPKSSAIKVIDFGSTTYEHQDHSYIVSTRHYRAPEVILGLGWSYPCDIWSIGCILVELCSVCFLSYNHMSILDLTSISRQHHVLLQGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGDLIDLLQGLLRYDPSDRLTAREALRHPFFTRDHHRRS* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00499 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Eupl04g00499 393 ProSiteProfiles Protein kinase domain profile. 32 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00499 393 Gene3D Phosphorylase Kinase; domain 1 28 112 - -
Eupl04g00499 393 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 33 255 - -
Eupl04g00499 393 Gene3D Transferase(Phosphotransferase) domain 1 113 392 - -
Eupl04g00499 393 SMART serkin_6 32 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00499 393 SUPERFAMILY Protein kinase-like (PK-like) 34 389 IPR011009 -
Eupl04g00499 393 CDD PKc_CLK 29 385 - -
Eupl04g00499 393 Pfam Protein kinase domain 35 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00499 Eupl-Chr4 7794921 7799962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00499 37 385 Core Cell Cycle Gene Families AT1G76540 23.611 2.88e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Eupl04g00499 Pkinase 6.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00499 K08287 - ming:122067663 663.685