Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00476 ATGGCTTCCCTTCCCTCGAAATGTCATCTGTCTGTCCTCGTTTTCCTCTTTCACGTCGTTCTTATCCAAGCCAGATTGAATCTCGACCGTTCAGATTCCGATACGCTCTTGCTTTTCATAAACGACTTGGGCTTTAGTGGTCAACGCGATCCGGGGGAGAACCCCTGCAAGTCCGAGGGAATCTTCTGCGAGAGGAGAATCTCCGATAACTCGCCGGTACTCCGAGTCAGTCGTATCGTCTTACATTCACAACGGCTCAACGGGTTCTTATCTCCGGCAATTGGACGGTTCTCTGAACTGAAAGAGCTCTCTCTCCCCAACAACCACCTTGTTGACCGTATTCCTCCCGAAATTGTTGACTGCCGTAAGTTGCAAGTTCTAAACCTCCGAAATAACAGTTTTTCCGGAAAAATCCCTTCGGAATTCTCATCTCTTGTAAGTCTCCGAGTCCTCGATCTTTCTTCGAATAGATTTTCAGGTGATTTAAGCTTCTTGAAATATTTTCCAAACCTCGAAAACCTCTCTCTTTCGGATAATCTGTTTACCGGAAAAATTCCGATGTCGCTGCGTTCTTTCAATCTCCGATTTATCAATCTTTCCGGCAATAGTTACCTCCAAGGCTCAGTGCCTACTTCGATGAACCGGGTAGAATATTCCCTCCATGAGTTGAAGAAAGAGAATATTCTCCCGACGCGTTATATATTCGCCGAGAATTCGAGAAGAAACCAGGGTCCTGCCATGGCACCAACGGCAAGTAACGCCTCCAATGAAGATGCCTCTCCAGCTCCTTCTCCCTCAGCTACAATCCCTAAACACCACAAAAATAAAAGAAAGCTAAGGGGTTGGATTCTTGGGTTCATTGTCGGTGTAATTGCCGGAATGATATCGGGTTTGGTCTTCTCTGTTCTATTTAAGCTTTTCTTGATTTACATCAGAGGGGGAGTGAAAGATTCGGGGCCGGCGATCTTCAGCCCAATGATCAAGAAAGCCGAAGATCTAGCCTTTTTAGAGAAAGAAGATGGGCTTTCGTCTCTGGAGATAATTGGACGAGGTGGGTGCGGAGAAGTTTACAAGGCAGAATTACCTGGAAGCAATGGGAAGATGATTGCAATCAAGAAGATAATTCAGCCGTCCATCGATGCAGCTGATCTCACTGACGAAGATAGCAGGCTTCTGAACAAGAAGATGAGGCAAATTAAGTCGGAAATTCAAACAGTGGGTCAGATCCGACACCGGAATCTCATTCCTTTGCTAGCCCATGTATCCCGACCCGATTGCCATTACCTTGTCTATGAGTTCATGAAGAACGGGAGCTTACAAGATGTACTGAAGCAGGTCACCGACGGAACCAGAGAATTAGATTGGCTGGTGCGATACAGGATTGCTCTCGGGGTTGCAGCAGGGATTGAGTATCTCCACATGAATCACAGCCCTCGAATAATTCATAGGGATCTCAAACCCGCAAATATCCTCCTCGATGATGACATGGAAGCCCGTATTGCAGACTTCGGGCTTGCGAAGGCGGTCCCAGACATAAACACCCATGTGTCAACATCCAACGTGGCAGGAACAGTGGGATACATAGCACCGGAGTATCACCAGACATTCAAGTTCACAGACAAGTGCGACATATATAGCTTTGGGGTATTGCTGGCTGTGTTGGTGACGGGGAAATTGCCATCTGATGAATTCTTCCAACACACGGAGGAGATGAGCCAAGTGAAGTGGCTGAGGAATGTGATGACGTCGGATGAACCAAATAAGGCAATCGATCAAAAACTGAGGGGAAATGGGTTCGAGAACCAGATGCTTCTGGTTCTCAAGATTGCTTGGTTCTGCACTCTGGATGATTCAAAGCAGAGGCCCAATAGTAAAGATGTTCGGTGCATGCTGTCTCAAGTCAACCATTAA 1911 0.4673 MASLPSKCHLSVLVFLFHVVLIQARLNLDRSDSDTLLLFINDLGFSGQRDPGENPCKSEGIFCERRISDNSPVLRVSRIVLHSQRLNGFLSPAIGRFSELKELSLPNNHLVDRIPPEIVDCRKLQVLNLRNNSFSGKIPSEFSSLVSLRVLDLSSNRFSGDLSFLKYFPNLENLSLSDNLFTGKIPMSLRSFNLRFINLSGNSYLQGSVPTSMNRVEYSLHELKKENILPTRYIFAENSRRNQGPAMAPTASNASNEDASPAPSPSATIPKHHKNKRKLRGWILGFIVGVIAGMISGLVFSVLFKLFLIYIRGGVKDSGPAIFSPMIKKAEDLAFLEKEDGLSSLEIIGRGGCGEVYKAELPGSNGKMIAIKKIIQPSIDAADLTDEDSRLLNKKMRQIKSEIQTVGQIRHRNLIPLLAHVSRPDCHYLVYEFMKNGSLQDVLKQVTDGTRELDWLVRYRIALGVAAGIEYLHMNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAVPDINTHVSTSNVAGTVGYIAPEYHQTFKFTDKCDIYSFGVLLAVLVTGKLPSDEFFQHTEEMSQVKWLRNVMTSDEPNKAIDQKLRGNGFENQMLLVLKIAWFCTLDDSKQRPNSKDVRCMLSQVNH* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00476 636 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 72 162 - -
Eupl04g00476 636 MobiDBLite consensus disorder prediction 243 263 - -
Eupl04g00476 636 Pfam Protein kinase domain 344 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00476 636 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 71 633 - -
Eupl04g00476 636 Gene3D Ribonuclease Inhibitor 30 163 IPR032675 -
Eupl04g00476 636 MobiDBLite consensus disorder prediction 241 273 - -
Eupl04g00476 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Eupl04g00476 636 FunFam Leucine-rich repeat receptor-like protein kinase 434 636 - -
Eupl04g00476 636 ProSiteProfiles Protein kinase domain profile. 342 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00476 636 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Eupl04g00476 636 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 329 433 - -
Eupl04g00476 636 Gene3D Transferase(Phosphotransferase) domain 1 434 635 - -
Eupl04g00476 636 Gene3D Ribonuclease Inhibitor 164 231 IPR032675 -
Eupl04g00476 636 Gene3D Phosphorylase Kinase; domain 1 329 433 - -
Eupl04g00476 636 SUPERFAMILY RNI-like 77 212 - -
Eupl04g00476 636 SUPERFAMILY Protein kinase-like (PK-like) 333 631 IPR011009 -
Eupl04g00476 636 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00476 Eupl-Chr4 7429236 7431453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00476 10 636 Receptor kinase-like Gene Family AT2G31880 61.033 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Eupl04g00476 Pkinase 7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00476 - - nnu:104593027 916.761