Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00453 ATGGCTTCAAACGAGGGGTTTCTTACTGGTGAACAGAGAGAAGTGTTGAAAATAGCGTCTCATAATGCAGAAATACTGTCTTCATCGCCGAAATCCCCAACGTCCTTGAATCCGGATCATCAGATAAAAGTTGCCACAGGTGGGAAGGCGCCGACAGTTGGATTTGCTGTGAGGCATGTGCGTCGTTCCCACTCGGGAAAGCTGGTACGCGTGAAGAAAGATGGTGCTGGTGGCAAAGGCACATGGGGTAAACTACTTGACACTGATGGTGATTCGCGTCTCGATCGGAATGATCCAAACTATGACAGTGGTGAGGAACCGTATCAACTCGTAGGTTCGACCATCTCTGATCCTTTGGATGAATATAAGAAAGCTGTGGTTTCCCTAATAGAGGAATACTTCAGCACGGGTGATGTAGAATTGGCAGCGTCTGACCTCAGAGATCTTGGCTCAAGTGATTATCATCCCTATTTTGTTAAGAGACTGGTCTCCATGGCCATGGACAGGCATGATAAGGAGAAGGAGATGGCTTCAGTTTTGCTCTCAGCTCTCTATGCTGATGTGATCAGCTCAGCTCAGATCAGTCAAGGATTTGTTATGCTTCTTGAGGCTTCCGATGACCTGGCACTTGACATACTCGATGCGGTTGACATCCTCGCTCTGTTCATTGCACGGGCGGTGGTTGATGACATCCTCCCCCCTGCTTTCCTCACCAGAGCAAAGAAAACACTCTCAGAATCCTCTAAAGGACTTCAAGTTATACAAACTGCCGAGAAGAGCTACCTTTCAGCTCCTCACCATGCAGAGCTTGTGGAAAGACGATGGGGTGGCAGCACCCACATCACTGTTGAGGAGGTGAAGAAAAAGATTGCTGATTTGTTGAGGGAGTATGTTGAGAGTGGAGATACAGCAGAGGCTTGTCGGTGCATAAGGGAATTAGGGGTCTCGTTCTTCCATCATGAGGTTGTGAAGAGGGCTCTGGTCCTTGCCATGGAGATCCAAACAGGGGAGCCGATCATATTGAATCTGTTGAAAGAAGCAGCGGAAGAAGGCTTGATAAGTTCTAGTCAGATGGCTAAAGGGTTTGGTCGGCTTGCTGAGAGCCTGGATGACCTCTCTCTTGACATCCCATCTGCAAAAGCCTTGTTCCACTCACTGGTTCCAAAGGCAATCTCCGAGGGATGGCTGGATGCATCGTTTCTCAAATCCTCTGGTGAAGATGGAGAGTTGCAAGATGAAAATGACAAAAACATGAGGCGATTCAAGGAAGAGGCTGTGACAATCATTCATGAATATTTTCTTTCAGATGACATACCTGAACTGATTCGGAGCCTTGAAGATCTTGCTGTTCCAGAGTTCAACTCAGTCTTTCTCAAGAAGCTAATCTCCCTTGCCATGGACAGGAAGAACAGAGAGAAGGAGATGGCATCTGTTCTGCTATCTGCACTTCATACTGAACTGTTCTCCACTGATGACATTGTTAATGGGTTCGTCATGCTTCTGGAATCTGCAGAGGATACTGCACTCGACATATTGGATGCCTCAAACGAGCTCGCTCTATTCCTGGCCAGGGCAGTGATTGATGATGTTCTGGTCCCTTTAAATTTGGAGGAGATAAGCAGTAAGCTGCCAGCAAATTGCAGTGGGACAGAGACCGTCCACATGGCTCGTTCACTTCTCGCTGCCCGTCATGCAGGCGAGAGGATCCTAAGGTGCTGGGGAGGTGGCACTGGTTGGGCCGTGGAGGATGCCAAGGACAAGATAATAAAGCTACTGGAGGAGTATGAGAGTGGGGGCGTGGTGAGTGAAGCTTGCCAGTGCATTCGTGATCTTGGGATGCCCTTCTTCAACCATGAGGTGGTGAAAAAGGCACTGATTATGGCAATGGAGAAGAAGAATGACAGGATGCTGGATCTGCTGCAGGAGTGCTTTGGTGAAGGACTGATCACCATAAACCAGATGACCAAAGGCTTCGCCAGGATCATGGACGGGCTCGATGACCTAGCTCTGGACATTCCAAATGCGGAAGAGAAGTTTGGGTTTTACGTAGAGCATGCTAAGAAGAACGGGTGGCTGTTGCCAACGTTTGTGTCATCTGTTGCTGCATAA 2109 0.4846 MASNEGFLTGEQREVLKIASHNAEILSSSPKSPTSLNPDHQIKVATGGKAPTVGFAVRHVRRSHSGKLVRVKKDGAGGKGTWGKLLDTDGDSRLDRNDPNYDSGEEPYQLVGSTISDPLDEYKKAVVSLIEEYFSTGDVELAASDLRDLGSSDYHPYFVKRLVSMAMDRHDKEKEMASVLLSALYADVISSAQISQGFVMLLEASDDLALDILDAVDILALFIARAVVDDILPPAFLTRAKKTLSESSKGLQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDTAEACRCIRELGVSFFHHEVVKRALVLAMEIQTGEPIILNLLKEAAEEGLISSSQMAKGFGRLAESLDDLSLDIPSAKALFHSLVPKAISEGWLDASFLKSSGEDGELQDENDKNMRRFKEEAVTIIHEYFLSDDIPELIRSLEDLAVPEFNSVFLKKLISLAMDRKNREKEMASVLLSALHTELFSTDDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLVPLNLEEISSKLPANCSGTETVHMARSLLAARHAGERILRCWGGGTGWAVEDAKDKIIKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALIMAMEKKNDRMLDLLQECFGEGLITINQMTKGFARIMDGLDDLALDIPNAEEKFGFYVEHAKKNGWLLPTFVSSVAA* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00453 702 Pfam MA3 domain 421 531 IPR003891 -
Eupl04g00453 702 Pfam MA3 domain 286 397 IPR003891 -
Eupl04g00453 702 Pfam MA3 domain 585 692 IPR003891 -
Eupl04g00453 702 Pfam MA3 domain 123 233 IPR003891 -
Eupl04g00453 702 ProSiteProfiles MI domain profile. 420 541 IPR003891 -
Eupl04g00453 702 ProSiteProfiles MI domain profile. 583 702 IPR003891 -
Eupl04g00453 702 MobiDBLite consensus disorder prediction 80 108 - -
Eupl04g00453 702 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Eupl04g00453 702 Gene3D - 116 262 - -
Eupl04g00453 702 Gene3D - 409 564 - -
Eupl04g00453 702 FunFam Programmed cell death protein 4 271 406 - -
Eupl04g00453 702 MobiDBLite consensus disorder prediction 86 102 - -
Eupl04g00453 702 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Eupl04g00453 702 SUPERFAMILY ARM repeat 282 403 IPR016024 -
Eupl04g00453 702 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Eupl04g00453 702 Gene3D - 272 404 - -
Eupl04g00453 702 Gene3D - 571 701 - -
Eupl04g00453 702 PANTHER PROGRAMMED CELL DEATH 4 3 696 IPR039778 GO:0045892
Eupl04g00453 702 SMART ma3_7 286 397 IPR003891 -
Eupl04g00453 702 SMART ma3_7 122 233 IPR003891 -
Eupl04g00453 702 SMART ma3_7 421 532 IPR003891 -
Eupl04g00453 702 SMART ma3_7 584 693 IPR003891 -
Eupl04g00453 702 FunFam programmed cell death protein 4 113 264 - -
Eupl04g00453 702 SUPERFAMILY ARM repeat 417 576 IPR016024 -
Eupl04g00453 702 SUPERFAMILY ARM repeat 580 699 IPR016024 -
Eupl04g00453 702 FunFam programmed cell death protein 4 409 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00453 Eupl-Chr4 7095444 7105449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00453 587 683 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 6.73e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00453 - - nnu:104593008 1209.13