Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00434 ATGGGTCTTTTCTGTTCTTTTCTGGTTTTATTTCTTCATTTAGTTCCTTCTGTTGTCTGCCAAGTCAAAGAGTTTGTCAGTATAGACTGTGGAGGTACAAGTAATTACACCGATCCAAGTACCGGACTAGCATGGATTTCGGACACTGGGTTCATTAGACATGGTAAGGTAGCAGAAGTTGGGAGTCCAAACGGAGACAATCTGCAGTATCGGAGACGCCGAGACTTCCCTGCAGACAACAAGAAATACTGCTATACTCTAAATACAACAGAGAGAAGGCGGTACCTTGTCCGAGCGACATTTCAGTATGGCAAGTTGGACACTGGAGATCCGTATCCCAAATTTCAGCTCTTCTTGGATGCTACTATGTGGTCAACCATAACAGTCTTGGATGCGTCTAGAGTATATGTTGAGGAAATGATCATCAGGGCACCCTCTAATTCTATAGATGTGTGTCTGTGTTGTGCATCAACCGGTTCTCCTTTCATATCTACTCTCGAACTGCGGCCTTTAAATCTTTCGATGTATGCTACAGATTACGAAGATGATTTCTTCCTCAAGGTTGCAGCAAGGGTAAATTTTGGAGCTCCGAGCAAAGATGTTGTAAGGTACCCAGATGACCCTTATGACCGAATATGGGAATCGGATTTAGATAAAAGGCAGAATTATCTAGTGGGGGTGGCTCCTGGGACAGAAAGAATCGGTACTTCCCAGAACATTGGCACAAGAACACGAGAATACCCACCTGTTAAAGTGATGCAAACTGCGGTAGTGGGCACCAAAGGAAGGCTCAGCTACAGGTTAAACCTTGAAGGTTTCCCTGCTAATGCTCGAGCTTATGCCTACTTTGCTGAAATTGAAGATTTGGGTAGGAATGAAACTCGGAAATTTACAATGCAGAAACCTTATGCGCCTGGCTATAGCAATGCCGTGGTAAATATTGCTGAGAATGCCAATGGGAGCTACACTCTTTATGAGCCTAGCTACATGAACATATCATTGGATTTTGTTTTGTCATTCTCGTTTGTCAAGACTCGGGATTCTACTCGAGGGCCGCTTTTAAATGCAATAGAGATCAGTAAATATGTGCAGATTATCCCCAAGACAGAGAATCAAGATGTGACTGTTCTGGATGCCCTCCGCTCCATGTCCCCTGGAAGTGATTGGACTCGTGAAGAAGGTGATCCCTGCAACCCAGTTCACTGGGAGTGGGTGACTTGCAGTTCCAGCACACCACCAAGGATTACAAAAATTGTTCTATCAGAAAAAATATTGAAGGGTAACATTCCAACCGAGCTTAAGCATTTGGAGGGTTTAACGGAGTTGTGGTTGGACGGTAACTCCTTGACTGGGCCAATCCCTGACCTGAGCAACCTAATCAGTTTGACCATTGTGCATCTAGAGAACAACAAACTGACTGGCCCATTACCGTCTTACTTTGGTGACTTGCCGAGCTTACGAGAATTGTATGTTCAGAACAACTCTTTAAGTGGGGAAATAGTTCAGACATTGTCAACCGGAAAATTGGTATTCAATTATGATGGCAATCCTGAACTAATTCGAAGGGGGCAGCACAAGACGAACTTTAAGTTGATACTTGGTACATCAATTGGAGCATTTGCTTTCTTTCTAGTGTTGCTGTTAGGAAGTTTATTAATGTTACGTAATCTTCGAAGGCAGCTGTCTCAGCAGAAAAGTGAAGAAAAATGTAATTCTTTGGGCATCATTTCCAAACCTTCAACTACCTATTCTCTTGTGCAAGGTAGATCCTTGATGGATGATGGCCTGGATGTAGCTTACCATATTACATTCTCTGAGCTAGAAGAAGCTACCCAAAAATTTTCAAAGAAAATTGGAAGAGGGAGCTTTGGACCTGTCTATTATGGCAAAATGAAAGATGGAAAAGAAGTGGCGGTTAAGATCTTGGCTGACACATGTAGCCATGGGACACACCAATTTGTGAATGAGGTTGCACTCTTGTCAAGAATTCATCATAAAAACTTGGTTCCTTTGATTGGCTATTGTGAAGAAGCACAACAACGAATTCTGGTTTATGAGTATATGCACAACGGGGCTCTGCGGGATCGTATACATGATTCTGTTAACCAGAAGTGCTTGGACTGGCTATCTCGTCTTTCTATCGCAGAAGATGCGGCTAAAGGCCTAGAGTACTTACACAGTGGGTGCAACCCAAGCATTATTCACCGAGACGTGAAGACTAGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTCGGACTTTCAAGGCAAACTGATGAAAACCTCACCCATGTATCAAGTGTTGCATGTGGAACAGTGGGATACCTTGATCCTGAGTATTACGCAAATCAACAGTTGACTGAAAAGAGCGATGTTTACAGTTTTGGGGTTGTTCTCCTGGAGCTAATCTCAGGAAGAAAGCCTGTCTCAGTAGAAGATTATGGTGCTGAGTGGAACATTATTCACTGGGCAAGATCCTTGATTCGTAAAGGGGATGTGTCAAGAATTGTAGATCCTTCATTAGCAGACAAAGTCAAAATTGAGTCTCTATGGAGGATAGCTGAAGTTGCAATTCTAAGCGTTGAGCCGCACAGAGTTTCCAGGCCGAAGATGCAGGAAATAGTGTTGGCTATTCAAGACACTATTAAGATCGAAAAAGGAAGCAGCAAAAGCAGTAACAGAATAACTTCAGATTCATCTACAATGCAATTTTACCACATGAGGTTACCATCAGACCCTATCGACATTGAAAATTCTGATCTGTCAAAGGGGTGTGCACTCCCATCTGCAAGATAG 2808 0.4288 MGLFCSFLVLFLHLVPSVVCQVKEFVSIDCGGTSNYTDPSTGLAWISDTGFIRHGKVAEVGSPNGDNLQYRRRRDFPADNKKYCYTLNTTERRRYLVRATFQYGKLDTGDPYPKFQLFLDATMWSTITVLDASRVYVEEMIIRAPSNSIDVCLCCASTGSPFISTLELRPLNLSMYATDYEDDFFLKVAARVNFGAPSKDVVRYPDDPYDRIWESDLDKRQNYLVGVAPGTERIGTSQNIGTRTREYPPVKVMQTAVVGTKGRLSYRLNLEGFPANARAYAYFAEIEDLGRNETRKFTMQKPYAPGYSNAVVNIAENANGSYTLYEPSYMNISLDFVLSFSFVKTRDSTRGPLLNAIEISKYVQIIPKTENQDVTVLDALRSMSPGSDWTREEGDPCNPVHWEWVTCSSSTPPRITKIVLSEKILKGNIPTELKHLEGLTELWLDGNSLTGPIPDLSNLISLTIVHLENNKLTGPLPSYFGDLPSLRELYVQNNSLSGEIVQTLSTGKLVFNYDGNPELIRRGQHKTNFKLILGTSIGAFAFFLVLLLGSLLMLRNLRRQLSQQKSEEKCNSLGIISKPSTTYSLVQGRSLMDDGLDVAYHITFSELEEATQKFSKKIGRGSFGPVYYGKMKDGKEVAVKILADTCSHGTHQFVNEVALLSRIHHKNLVPLIGYCEEAQQRILVYEYMHNGALRDRIHDSVNQKCLDWLSRLSIAEDAAKGLEYLHSGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRQTDENLTHVSSVACGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGRKPVSVEDYGAEWNIIHWARSLIRKGDVSRIVDPSLADKVKIESLWRIAEVAILSVEPHRVSRPKMQEIVLAIQDTIKIEKGSSKSSNRITSDSSTMQFYHMRLPSDPIDIENSDLSKGCALPSAR* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00434 935 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 688 895 - -
Eupl04g00434 935 Pfam Protein tyrosine and serine/threonine kinase 613 813 IPR001245 GO:0004672|GO:0006468
Eupl04g00434 935 ProSiteProfiles Protein kinase domain profile. 612 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00434 935 SMART serkin_6 612 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00434 935 Gene3D Phosphorylase Kinase; domain 1 584 687 - -
Eupl04g00434 935 PANTHER OS07G0107800 PROTEIN-RELATED 456 886 - -
Eupl04g00434 935 Gene3D Ribonuclease Inhibitor 376 516 IPR032675 -
Eupl04g00434 935 SUPERFAMILY Protein kinase-like (PK-like) 598 886 IPR011009 -
Eupl04g00434 935 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 410 500 - -
Eupl04g00434 935 CDD STKc_IRAK 618 879 - -
Eupl04g00434 935 FunFam receptor-like serine/threonine-protein kinase NCRK 592 687 - -
Eupl04g00434 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Eupl04g00434 935 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Eupl04g00434 935 Gene3D Transferase(Phosphotransferase) domain 1 688 907 - -
Eupl04g00434 935 SUPERFAMILY L domain-like 397 505 - -
Eupl04g00434 935 Pfam Malectin-like domain 28 361 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00434 Eupl-Chr4 6867503 6876670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00434 1 935 Receptor kinase-like Gene Family AT1G67720 66.239 0.0 1245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Eupl04g00434 Malectin_like 3.1e-89 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00434 - - nnu:104592991 1478