Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00431 ATGGAGAATGGTTTCGCTTCACCTCGAACAGAGGGTTTTCCGGCCGGTCTTCGTGTTCTTGTTGTTGATGACGATCCAACTTGGCTGAAAATCCTTGAAAAGATGCTTAAGAAGTGCTCTTATGAAGTGACCACATGTTGTTTAGCAAGAGATGCCCTGGACATCCTTCGTGAAAGAAAAGATGGATTCGACATTGTAATTAGTGATGTCAACATGCCGGACATGGATGGTTTCAAGCTCCTTGAACATGTTGGGCTTGAGATGGATCTACCTGTTATAATGATGTCTGTTGATGGGGAAACAAGCAGGGTGATGAAAGGTGTCCAACATGGAGCATGCGATTATCTTCTTAAGCCTGTACGAATGAAAGAACTTCGAAATATATGGCAACATGTCTTTAGAAAGAAAATTCATGAGGTGAAAGACATAGAAAGTCAGGAAGGCAATGAAGATTTTCTGAAGATGAGAAATGGATCAGATGAATTTGATGATGGACACTTTCAAACTGGAGCTGATCCGAGTTCAAAGAAAAGGAAAGATATGGAGAACAAAGAGCATGATGACCAAGATTTTAATGATCCTTCTGCTGTGAAGAAGGCTAGAGTAGTTTGGTCTGTAGATCTTCATCAGAAATTCGTCAATGCCGTAAATCATATCGGATTTGATAAAGTTGGTCCTAAGAAAATACTGGACTTGATGAATGTTCCTTGGCTGACAAGAGAAAATGTTGCTAGCCACCTGCAGAAATACCGCCTCTATTTGAGTAGGTTGCAGAAGCAAAAAGAAACAAAGACTTCTTTTGGTGGGATAAAGCAACCAGATTTCACAGCTAAGGATGCTCCTGGAAGCTTTGGCCTTCAGAGATCAATCACAATGCACCAAAACAATCCAGCTAGCTGCAGCTTCATATACTCCGGCAATAAAATACTTGTCCAAGATGTGGGCCCAGAAATCCATGAAGGAGATTTGAAGGGAATTGCTTCGTTCTTGCCTGTAGCAGAACCCAAAAAAGCTTTGACTGCTGATGTTCCTGATCCTCAGAAACTGAGCAATGGTTCTCGAATGGGCCTCACTCGTTCTCTTGGGTCACTGGAGCCAGATGTCAATTATACATCATTTGAGTCCACTATCCCCCAGCATCACTCTTGGAGTGGAGAAATTCCAATGGTGCAATTCAAGCAACAAGCAAAACAAAAGCACGAGCTATATGGCTACACCCATCTGGCACTGCCTGGTCCACAGCATCACATCCAAGCCGATCAACTACGACCTGCTCCATCCATTAAACCTGGAACTTCTATCACAGAAAGAGATAAAGCAGGCCCCTCTGAAATCAAGCCTTTGTGTACTGATTACAGAAGCAACCATATCAGAAATGTATCTCCACCAGGACGCAAGATGGATTCATTTTCTGTTCAATCTGAGACCGACATATTAAATCCTCAAGCTTTTGGGGGCATATCCACTATTCCTGCACCACTGAGGATGAAAAATCACAGCTTTGATCAGAACTGTGTAAGTAATTCTCACCGACAAAACATTATTCCTGGAAGTGAGTCAACTTTGGCATCTTCGCACGAGGACTTACAACTCTGTTTGCTTCAAGATTATGGTTGCCTCGAGAACGATGGGCTCCACAACATAGAATTTTTTGAGTACCATGATCCAGACCTCATTACTGAACTTCCAAGTCACTTGTACGACGACGTGAGGCTTAACTGCGATTATATCTGTGACTCAGTGGAGTATCCTATTATGGATCAAGGTCTATTCATAGCATGA 1782 0.4248 MENGFASPRTEGFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALDILRERKDGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHVFRKKIHEVKDIESQEGNEDFLKMRNGSDEFDDGHFQTGADPSSKKRKDMENKEHDDQDFNDPSAVKKARVVWSVDLHQKFVNAVNHIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKQKETKTSFGGIKQPDFTAKDAPGSFGLQRSITMHQNNPASCSFIYSGNKILVQDVGPEIHEGDLKGIASFLPVAEPKKALTADVPDPQKLSNGSRMGLTRSLGSLEPDVNYTSFESTIPQHHSWSGEIPMVQFKQQAKQKHELYGYTHLALPGPQHHIQADQLRPAPSIKPGTSITERDKAGPSEIKPLCTDYRSNHIRNVSPPGRKMDSFSVQSETDILNPQAFGGISTIPAPLRMKNHSFDQNCVSNSHRQNIIPGSESTLASSHEDLQLCLLQDYGCLENDGLHNIEFFEYHDPDLITELPSHLYDDVRLNCDYICDSVEYPIMDQGLFIA* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00431 593 SUPERFAMILY CheY-like 16 140 IPR011006 -
Eupl04g00431 593 SMART REC_2 17 129 IPR001789 GO:0000160
Eupl04g00431 593 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
Eupl04g00431 593 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 345 IPR045279 GO:0009736
Eupl04g00431 593 FunFam Two-component response regulator 195 258 - -
Eupl04g00431 593 CDD REC_typeB_ARR-like 19 133 - -
Eupl04g00431 593 MobiDBLite consensus disorder prediction 154 193 - -
Eupl04g00431 593 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Eupl04g00431 593 MobiDBLite consensus disorder prediction 424 447 - -
Eupl04g00431 593 Gene3D - 196 258 - -
Eupl04g00431 593 Gene3D - 17 164 - -
Eupl04g00431 593 SUPERFAMILY Homeodomain-like 197 256 IPR009057 -
Eupl04g00431 593 NCBIfam myb-like DNA-binding domain, SHAQKYF class 199 252 IPR006447 GO:0003677
Eupl04g00431 593 FunFam Two-component response regulator 17 173 - -
Eupl04g00431 593 Pfam Myb-like DNA-binding domain 201 251 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00431 Eupl-Chr4 6834429 6846665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00431 13 257 Response Regulator Gene Family AT2G25180 57.895 1.11e-82 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Eupl04g00431 Response_reg 2.9e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00431 K14491 - nnu:104593282 800.816