Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00405 ATGAGAGTTGAAGGTTCTTCGACGCCTTGGCTTGTGAAGAGGAGAAGGTTGATGAGCTTTGATCCAATGGAGGCAGGCATCGCTAAGGCTAAACTCGCAGCTATGGTGGAAGAACTTGGAAGAGAAATCCGTGTGTTTGAGACAGCGACAACTTCTCCAACATCGGAGAAGGTGTCTAATAATGAGGAGCCAGATGATTTCTATGAGTTCACTGCAGAGGACTATCACCGAATTTTGTCAACCAAAAAGCAAGATAGATTTCTGAAGACGCGTAAACTCCGGGAAGCAGAGGAGGCTGCTCGCAGAACAAGAATAACTAAGGCAATAATTAGGGTCCGTTTCCCCGATAATTACACATTCGAAGCAAAGTTTCACCCATCAGAGACAGTTCAAAGTTTAATTGATCTTCTCATGAAAGTGGTTGCTCGACCTGACCTACCATTCTATATATATACGACTCCTCCAAAGAAGCAAATAAAAGATATGTCTCAGGATTTATACTCTGCTGGCTTTGCTCCTGGTGCAATTGTGTATTTCTCGTACGATCTACCAAAAGGAGATGACAGTGCAGGTGCAAATTCAGGGCCCTTCCTTCGAGATGAGATCCAGTCTTTGAATGGCCTACATCTTATTTCAGAGCAGGCGCAGTCCGACTCCATGCAATCTGCACCAGAACCTGTCGTAGTGGAACCCTCCCCTGATGTTCAAGAGGTTAAGCCTACTGAGAAGAAACCTGCTAAGCCAAAATGGTTTAAAATGTGA 762 0.4462 MRVEGSSTPWLVKRRRLMSFDPMEAGIAKAKLAAMVEELGREIRVFETATTSPTSEKVSNNEEPDDFYEFTAEDYHRILSTKKQDRFLKTRKLREAEEAARRTRITKAIIRVRFPDNYTFEAKFHPSETVQSLIDLLMKVVARPDLPFYIYTTPPKKQIKDMSQDLYSAGFAPGAIVYFSYDLPKGDDSAGANSGPFLRDEIQSLNGLHLISEQAQSDSMQSAPEPVVVEPSPDVQEVKPTEKKPAKPKWFKM* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00405 253 SUPERFAMILY Ubiquitin-like 83 179 IPR029071 -
Eupl04g00405 253 Gene3D - 37 178 - -
Eupl04g00405 253 Pfam UBX domain 107 173 IPR001012 GO:0005515
Eupl04g00405 253 MobiDBLite consensus disorder prediction 214 253 - -
Eupl04g00405 253 ProSiteProfiles UBX domain profile. 103 179 IPR001012 GO:0005515
Eupl04g00405 253 CDD UBX2_UBXN9 108 181 - -
Eupl04g00405 253 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 253 IPR044232 GO:0032984|GO:0051117
Eupl04g00405 253 MobiDBLite consensus disorder prediction 236 253 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00405 37 136 C2H2 Transcription Factor Family AT2G01650 30.476 5.41e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00405 K15627 - nnu:104591631 354.369