Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00391 ATGGAAGAAGAGATCAAAGCAGAATTCGAAGGGAGCGGTTTTTCTCTGGACGAAGATGAGGAAATATTGAAGAAATGTCTTGCTTTCTGTATAAATTACAAGCTCAGACCTTCCGATCTCGTCTCAAGCTGGGAGGTTTTCTACATGAACAGGCAACTAAGCGGATCTACGGTACAGAATGCTCATATGGATGGTTTCGTATTGCATCTACAAAACGAACAGAAGGAAGCAGTGATTAAAGAGGAACCATATCTGCACATCTACTCCATTAATGATGTTGACATGATTATAAGTGATGAACATGAGGATACCAAAGAAGGTAATCTGGGAACTCCAACAGACCAACCAGAAAGATTGTATTCAGAACCACTTGATTTAACACCCGGGACAAATGGGAATAGGCCTTCTTCTGGGAAACCATCAAGGCTTGCCAGTAACCATATGACCCCTTTTGGGCAACGAACAAACAAATTTGTTGTGCAGTTCGCATTCAATAAGTCGCAAGATACAGAGAATGGCGTAAGAGAACACAAGCTTGAGGATCATGAGGATGATGTCATTAGGAGGGTTCCCTCCAGTGAGAGGTGTTCTTTACAAGTTCGGGGATCACAGCTGGAACCAGGTTGCAGGTTCATGTATGACAGGATTGAAGACAGGTTTAACTCCCTCGAGAATCGCATTAGAAGGCATGCAACTGCACTTATTGCTTCTAGACTCTACGAGGAACCGATGGACCCTACAGTGGCTTCACAGAAAAGTGTATTTTCGGTTGGCATGGTCTGTTGTGATGGAGAAGGTCATCTGAATGAGAAGTCCATCTTGTTACAAGGCAGTGTTGAGCATTCTGGAGGGCAACGTGTGCGTCTTGACTTACAGAAATTAACCTACTTTTCCTTTTTCCCCGGCCAGGTGGTGGGCATTGAGGGGCACAATCCTAGTGGACACTGTTTGATTGCATCAAAAGTGGTCGATTCTATTCCTTTGTTGGTATCTCCTGACATGGATTTGCCTCCAGCTAAGAAGCAAGCTATGGACCAGGAAGTTCAGCCGACTTCTCCTTCCAGTATTCTGGCAGAGCTATCTTTGGTTATTGCAGCTGGCCCATTTTCCACAACTGACAATTTATTATTTGAGCCTTTAATAGAATTGCTTGCTTATGCAAGCAGAAAGCAGCCTCAATTGCTTATGTTGCTGGGGCCATTTGTTGATTCCGAACATCCAGAGATTAAAACTGGAACTGTTGATAGAAGCGTTGATGATATTTTTCATGAAGAAATTCTCAGAAGGTTGCAAGATTATGCCGAATACATGGGTTCTTCTGTACGTGTGATTCTTGTGCCATCAATACGAGATGCTAGCCATGACTTTGTTTTCCCTCAGCCTGCATTCGATTTCCATCCATCTGATCTCAAACATCAGATAACGAGTCTTACAAATCCAGGGCTTTTTGACGCAAATGAGGTCAAGATAGGTTGCTGCACCGTGGATATCCTGAGACAGCTTAGTGGTGAGGAGATCTCGCGAATCCCAGCTGATGGATCATCTAGGGATCGCATGGGGCGACTTGCAACTCATGTACTCAGCCAGTGCAGCTTTTATCCTCTATATCCACCCTCAGAGGATGTTCCTTTGGATCTTTCGCTTGCACCAGAAGCTCTACAGATTTCTTCCATTCCAGATATTCTCATCTTGCCTTCAGACCTGGCTCCATTTGTGAAGGTACTGTCCAAAGGGGAAAGAACGGGCGAAGAAGTCAAGTGCATTTGTGTGAATCCTGGAAGATTGGCTAAGGGTGTCGGAGGGGGTACCTTTGTAGAGCTTAACTATCATGGGAATCCCGAGATCACAAATGCTTCAATTATCCGCATGTAG 1872 0.4439 MEEEIKAEFEGSGFSLDEDEEILKKCLAFCINYKLRPSDLVSSWEVFYMNRQLSGSTVQNAHMDGFVLHLQNEQKEAVIKEEPYLHIYSINDVDMIISDEHEDTKEGNLGTPTDQPERLYSEPLDLTPGTNGNRPSSGKPSRLASNHMTPFGQRTNKFVVQFAFNKSQDTENGVREHKLEDHEDDVIRRVPSSERCSLQVRGSQLEPGCRFMYDRIEDRFNSLENRIRRHATALIASRLYEEPMDPTVASQKSVFSVGMVCCDGEGHLNEKSILLQGSVEHSGGQRVRLDLQKLTYFSFFPGQVVGIEGHNPSGHCLIASKVVDSIPLLVSPDMDLPPAKKQAMDQEVQPTSPSSILAELSLVIAAGPFSTTDNLLFEPLIELLAYASRKQPQLLMLLGPFVDSEHPEIKTGTVDRSVDDIFHEEILRRLQDYAEYMGSSVRVILVPSIRDASHDFVFPQPAFDFHPSDLKHQITSLTNPGLFDANEVKIGCCTVDILRQLSGEEISRIPADGSSRDRMGRLATHVLSQCSFYPLYPPSEDVPLDLSLAPEALQISSIPDILILPSDLAPFVKVLSKGERTGEEVKCICVNPGRLAKGVGGGTFVELNYHGNPEITNASIIRM* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00391 623 FunFam DNA polymerase alpha subunit B 343 508 - -
Eupl04g00391 623 MobiDBLite consensus disorder prediction 103 149 - -
Eupl04g00391 623 Pfam DNA polymerase alpha/epsilon subunit B 363 573 IPR007185 GO:0003677|GO:0006260
Eupl04g00391 623 PIRSF DNA_pol_alpha_2 1 620 IPR016722 -
Eupl04g00391 623 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 612 IPR016722 -
Eupl04g00391 623 Gene3D - 1 75 IPR043034 -
Eupl04g00391 623 FunFam DNA polymerase alpha subunit B 1 74 - -
Eupl04g00391 623 Gene3D - 342 505 - -
Eupl04g00391 623 Gene3D - 516 620 - -
Eupl04g00391 623 MobiDBLite consensus disorder prediction 126 149 - -
Eupl04g00391 623 Coils Coil 213 233 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00391 2 623 Core DNA Replication Machinery Family AT1G67630 62.080 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00391 K02321 - nnu:104592955 963.755