Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00375 ATGGCGGCAGGGAGACACGGGAGCCATCGTGATAATGAATTCAGGGACTATAAGTCGGATCTCGAGGTTACGAGAAGGAGAGATATTTCCTACTCCAAGGATGAATATGGTCACCATCACAATGGCTACCGCGACCGAGAACGGGGCTGCAGTCTTGAAGCTGAGCGGAGCAAAGAGCGGGATGAAAGGGATAGATTTAGGGTTAGGCAGAAGGATATTAAGGAGAGGGAAGTAATAAATGGTGGGTACCATTCTTCTTCGAGTATGAGCAATTCATGCAGCAGTGATAGTGGTCGTAGGCGAACAGGGTTATCTGATATAAGTCCAGACCGGGAACCAGGTGAGTTATCGAGTGGATCTGATGGCGCCACGTCTGAATCTCAGGTTAAGGATAATGGGGTTTCGAAGTTTGAAAATGGGTTTCCGTTGCCTCCAGGTAAGAAACGGAAGTTTTCTCCGATTGTGTGGGATAGAGAAGAGAAGGAAGTAAGTAATTCATATAAAAATGGAGTTGGGTCAACCAGTTCTCCGCCTATGTCTCCTCCTGTGCTGCCTAAAGCTTTCGGCCAGTCTCCAAATATTATTCCAGATGAGGGTGCTCAGATTTCAACCATTAAACCTAACCAACTTCATGGTCCCCCGCCTTCATCACCCAAGTCTATGGTTGTATCTCTCTCGGTTGGGTCTGCTATAGCTGAGTCACCAGCAGGCTTATCCTCTTCATCGCCTCAGGAGCGGAGCAATGATCGAGAACCAGGGCAGATGGAAGAGGAAGACTTTGTTACAACATGGACTATCTCAGCCTCACGGTGGGCAGATGAGAGCAATTCCCCTGGTGATGTAGGTGAAGTTTATGAATACGAGGACATGCTTAAAATGAGGAAAAACATGTCTGCTTCCAGGTTGTTGGACACCAGGTTAAACACAAAAACGTCAAGTCCCGAGCTCGGGGAGCTCACTAGAGAAGGCTCAGAAGGAACTCGAGCAAAGTCATCAGAATCTGACGAAGGAGCCAACCGTGTTGGGTCTGCCAGTGAAGGTGAATTCCCTGAGAATGAGTTGGAGAAGAATGATTATATGGAGGTAGACGAAGAAGAAGAGAACAACAGTGTAACTGTTCACCAGTCAAATATGGATTCTCAGGGGGAAAATGATTCCCGTAAGACCCCAGAGCCTGTAGTCCTTCCACAAAGAAGTATAAACATGCTTCAGGGGTGTAGAAGTGTTTATGAGTTTGAGAGACTCAACAAGATAAATGAAGGCACTTACGGTGTTGTCTATAGAGCTAGGGACAAAAAGACGGGGGAAATTGTAGCGTTGAAGAAGGTGAAGATGGAGAAAGAAAGAGAAGGTTTCCCTTTGACTTCTCTGAGGGAAATAAACATTCTCCTGTCCTTTCATAACCCATCAATTGTTGACGTTAAGGAAGTCGTCATGGGCGACCTTGATAATATTTTTATGGTTATGGAGTATATGGAGCATGACCTTAAAGGGCTGATGGAAACAATGAAGCAGCCTTTTAGTCAGAGTGAAGTTAAATGCCTAATGCTACAGCTATTGGAGGGTGTTACGTATCTTCACGATAATTGGGTGCTACATAGGGATTTGAAAACTTCAAATCTTCTGATGAATAATCGGGGTGAGTTGAAGATTTGTGACTTCGGGTTGTCTCGCCAATATGGGAGCCCCCTGAAACCCTATACTCATTTGGTGGTCACTCTGTGGTACAGGGCACCTGAACTTCTATTAGGAGCAAAACAGTATTCAACAGCAATTGACATGTGGTCATTGGGTTGTATAATGGCCGAACTTTTAGCTAAGGAACCTCTATTTAGTGGGAAAAGTGAACCGGATCAGCTTGACAAAATCTTTAGAACTCTTGGCACACCAAGTGATACGATTTGGCCAGGGTTTTCCAAATTTCCTGGGTGCAAGGTCACCTTTGTTAAGCACCGGTCTCACCTACTGCGCAAGAAATTCCCACCCACATCTTTCACTGGATCTCCAGTCCTCTCCGATGCTGGATTTGACTTGTTGAGCAAACTTTTAACTTATGACCCTGAGAAGCGGATAACAGCACAAGATGCTCTTAACCACGAGTGGTTCCGTGAGGTTCCTCTCCCCAAATCGAAAGATTTTATGCCAACATTTCCCGCTCAACATGCTCAAGATAGGCGTCCACGAAGAATTATGAAGAGCCCAGATCCATTAGAAGAGCAGCGGAGAAAGGAGTTGCAACAAGGGGGATTAGGCAGTGGCGGTTTGTTTGGCTAA 2274 0.4569 MAAGRHGSHRDNEFRDYKSDLEVTRRRDISYSKDEYGHHHNGYRDRERGCSLEAERSKERDERDRFRVRQKDIKEREVINGGYHSSSSMSNSCSSDSGRRRTGLSDISPDREPGELSSGSDGATSESQVKDNGVSKFENGFPLPPGKKRKFSPIVWDREEKEVSNSYKNGVGSTSSPPMSPPVLPKAFGQSPNIIPDEGAQISTIKPNQLHGPPPSSPKSMVVSLSVGSAIAESPAGLSSSSPQERSNDREPGQMEEEDFVTTWTISASRWADESNSPGDVGEVYEYEDMLKMRKNMSASRLLDTRLNTKTSSPELGELTREGSEGTRAKSSESDEGANRVGSASEGEFPENELEKNDYMEVDEEEENNSVTVHQSNMDSQGENDSRKTPEPVVLPQRSINMLQGCRSVYEFERLNKINEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHNPSIVDVKEVVMGDLDNIFMVMEYMEHDLKGLMETMKQPFSQSEVKCLMLQLLEGVTYLHDNWVLHRDLKTSNLLMNNRGELKICDFGLSRQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLAKEPLFSGKSEPDQLDKIFRTLGTPSDTIWPGFSKFPGCKVTFVKHRSHLLRKKFPPTSFTGSPVLSDAGFDLLSKLLTYDPEKRITAQDALNHEWFREVPLPKSKDFMPTFPAQHAQDRRPRRIMKSPDPLEEQRRKELQQGGLGSGGLFG* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00375 757 FunFam Cyclin-dependent kinase G-2 494 733 - -
Eupl04g00375 757 Gene3D Phosphorylase Kinase; domain 1 397 493 - -
Eupl04g00375 757 ProSiteProfiles Protein kinase domain profile. 412 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00375 757 MobiDBLite consensus disorder prediction 321 335 - -
Eupl04g00375 757 MobiDBLite consensus disorder prediction 118 134 - -
Eupl04g00375 757 MobiDBLite consensus disorder prediction 1 282 - -
Eupl04g00375 757 PANTHER CELL DIVISION PROTEIN KINASE 411 708 - -
Eupl04g00375 757 Gene3D Transferase(Phosphotransferase) domain 1 494 731 - -
Eupl04g00375 757 MobiDBLite consensus disorder prediction 302 392 - -
Eupl04g00375 757 MobiDBLite consensus disorder prediction 1 79 - -
Eupl04g00375 757 SMART serkin_6 412 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00375 757 MobiDBLite consensus disorder prediction 722 745 - -
Eupl04g00375 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Eupl04g00375 757 MobiDBLite consensus disorder prediction 81 102 - -
Eupl04g00375 757 MobiDBLite consensus disorder prediction 712 757 - -
Eupl04g00375 757 SUPERFAMILY Protein kinase-like (PK-like) 404 708 IPR011009 -
Eupl04g00375 757 CDD STKc_CDC2L1 406 702 IPR045267 GO:0004674|GO:0005524|GO:0006468
Eupl04g00375 757 FunFam cyclin-dependent kinase G-2 isoform X1 397 493 - -
Eupl04g00375 757 MobiDBLite consensus disorder prediction 196 210 - -
Eupl04g00375 757 MobiDBLite consensus disorder prediction 260 274 - -
Eupl04g00375 757 MobiDBLite consensus disorder prediction 151 165 - -
Eupl04g00375 757 MobiDBLite consensus disorder prediction 233 248 - -
Eupl04g00375 757 Pfam Protein kinase domain 412 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00375 757 MobiDBLite consensus disorder prediction 302 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00375 Eupl-Chr4 6163572 6176648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00375 403 749 Core Cell Cycle Gene Families AT5G10270 43.947 1.30e-92 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Eupl04g00375 Pkinase 2.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00375 K08818 - nnu:104591657 1095.49