Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00371 ATGGCAGAAACAGACCCAAATCCTTCGATCGATCCAAAGAGCGGTTTCTGCTCAGAAACAAAGATCTTTCACAGTCTCAGACCTCCAGTCCCCCTCCCGCCGGCGACTTTCCCTCTCTCTGCCGCCGAATACGCCTTCTCTCTACTCCGCAGTTCCTCCTCCTCTCCGGGAAACATCACCGCACTCATTGACGCCACTACTGGCAATAGCCTTTCCTACTCCAATTTCCTCCGCCAAATCGAAACCCTAGCTGCTTCTCTGCAAACCTTAATCGGCCTCTCAAGAGGTGATATCGCCTTCATTCTCTCCCCAGCATGTGTTCAAATCCCAGTCCTCTACTTCTCTCTCCTCTCCCTCGGCGTCGTCATCTCTCCAGCCAATCCAACCAGCACAAAGTCCGAAATCTCCCGCCAAATCGCTCTCTCCAAACCCGTCATCGCCTTCGCTACTACTGCCACCGCTGACAAGCTCCCCTCCCTCCGCCACCGCACAATCCTCATCGACTCGCCCGATTTCCACTCCATGACAACGATTCCAAGCGGGAAACTCAACCGAGTCGAGGTGAACCAATCCGATTCCGCGGCGATTCTCTACTCGTCCGGAACGACTGGGCGAGTCAAGGGCGTAGTGTTGACTCACCGGAACTTCATCGGGCTGATTGCCGGGTTCTACGCGTTGCGGCCGGAGACGGAGGAGGAAAATCCACCACAATCGGTCTCGCTGTTTACAGTGCCATTGTTCCATGTTTTTGGGTTCTTTATGTGTGTGAGAGCTGTGACGATGGCAGAAACGGTGGTGTTGATGGAGAGGTTTGATTTTGCGGTGATGTTGAGAGCGGTGGAGACATTCCGGGTGACGTACATGCCGGTGTCGCCCCCTCTTGTTGTGGCGATGGCGAAGTCGGACATGGTCGAAAAATTCGATCTAAGCTCACTTCAGGTGGTGGGGTGTGGTGGAGCGCCGCTCGGGAAGGAGGTCTCGGAGAAGTTCATCAGTCGGTTTCCCCACGTGCAGATAGTGCAGGGGTATGCTTTGACGGAGACAACAGGAGGGGCTGCGAGGATGTTATCACCAGTTGAGACCGAGCGGTATGGGTCTGTGGGGCGCCTCTCTGAGAATATGGAAGCCAAGATAGTTGATCCTGTCTCTGGGTTGGCCTTGCCTCCGGACCAGCAAGGGGAGCTTTGGTTGCGTGGGCCAACCATCATGAAAGGTTATGTAGGAGACGACGAAGCGACTGCTTCTACACTGGATTCACAGGGCTGGTTAAAGACCGGCGATCTTTGTTATTTCGACTCCGATGGCTTCCTCTTTATTGTTGATAGGTTAAAGGAATTAATAAAATACAAGGCATATCAGGTTCCCCCAGCTGAGTTGGAGCATTTACTTCAATCCCATCCAGAAATCGATGATGTTGCCGTAATTCCGTACCCTGACGAAGATGCAGGGCAGATTCCAATGGCATTTGTAGTGAGAAAACCCGGTAGCAATCTCAATGAAGCTCAGGTTATGGATTTCGTTGCAAAACAGGTTGCACCATACAAGAGGGTACGTCGAGTTGCTTTCATCAACTCCATTCCAAAATCTCCTGCAGGAAAGATCTTGAGGAGGGAGCTGATTGATCTTGCTCTCTCTGGTCCTTCAGCTAGATTATGA 1656 0.5236 MAETDPNPSIDPKSGFCSETKIFHSLRPPVPLPPATFPLSAAEYAFSLLRSSSSSPGNITALIDATTGNSLSYSNFLRQIETLAASLQTLIGLSRGDIAFILSPACVQIPVLYFSLLSLGVVISPANPTSTKSEISRQIALSKPVIAFATTATADKLPSLRHRTILIDSPDFHSMTTIPSGKLNRVEVNQSDSAAILYSSGTTGRVKGVVLTHRNFIGLIAGFYALRPETEEENPPQSVSLFTVPLFHVFGFFMCVRAVTMAETVVLMERFDFAVMLRAVETFRVTYMPVSPPLVVAMAKSDMVEKFDLSSLQVVGCGGAPLGKEVSEKFISRFPHVQIVQGYALTETTGGAARMLSPVETERYGSVGRLSENMEAKIVDPVSGLALPPDQQGELWLRGPTIMKGYVGDDEATASTLDSQGWLKTGDLCYFDSDGFLFIVDRLKELIKYKAYQVPPAELEHLLQSHPEIDDVAVIPYPDEDAGQIPMAFVVRKPGSNLNEAQVMDFVAKQVAPYKRVRRVAFINSIPKSPAGKILRRELIDLALSGPSARL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00371 551 Pfam AMP-binding enzyme 55 449 IPR000873 -
Eupl04g00371 551 CDD 4CL 28 539 - -
Eupl04g00371 551 FunFam 4-coumarate--CoA ligase 2 445 546 - -
Eupl04g00371 551 Gene3D - 445 544 IPR045851 -
Eupl04g00371 551 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Eupl04g00371 551 Gene3D - 34 444 IPR042099 -
Eupl04g00371 551 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Eupl04g00371 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 16 541 - -
Eupl04g00371 551 SUPERFAMILY Acetyl-CoA synthetase-like 43 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00371 Eupl-Chr4 6125117 6139991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00371 1 551 Monolignol Biosynthesis Gene Families AT5G63380 57.699 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00371 K01904 - nnu:104592940 826.624