Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00368 ATGGGTCGAGCCCCATGTTGCAGTGGTGAGCACACGGGTCTGAAGAAGGGTCCGTGGACCCACGAAGAGGATCAAAAGCTCACATCCTTTCTCCTACTGAACCCTAACACTAGTTGGAGGCTGGTGCCACCAAAAGCAGGCTTGTTGAGATGTGGGAAATCTTGTAGGCTTAGATGGATGAATTATCTTAGACCAGATATAAGGAGAGGCAACTTCACCCCAGACGAGGAAAACCTAATCATTCAGCTCCATGCTGCAGTGGGTAACAAGTGGTCAGTTATAGCTTCACAACTACCAGGAAGAACAGATAATGAGATTAAGAACTTGTGGAATACAAGATTAAGGAAGATATTGGTCCTCCAAGGAATCAATCCAATAACTCATCAGCCTTTATGCAATCCTCTCTTGTCTGATTATGTGAAGCAATGGGTTAAGTCCATCGAAAGCGTGATTATCACCAGCTTAACGACGACGCAATCGTCAACTTCTTATAATAATAATAATATTAGCAGTCCCATTAACGGTCCTCTTGATGTTTCTCTCCTTCCTTTTGGGTCTCTACCTCCTCAATCATGTCTACTCGAAGGGAGTTTCGCTCGACCGGACATCGCCAACTCAACTTCCCAGTACTCGACCTTCAATGGCGAGTCATGGGTTGGCGAAACTTCTCAGAGAAATGGGAGTTTCATTGATGACTTAACGGTGGATGAAGGTGCATCTTTGCCTAGTAATTTGAGTGATTATATATTAATGGATGGCAATCCTTTTACTTTTGAAGGGGGATTGGATTTAATGGAATCAGCTTTGTACATGGAGTTGCATGGTTTGGTAGTGTTCTTGGTGGAGCTGAGAGCTCGAGAGAAGAGAGATCTGAAATTCTCCATTAATGGCGGACTACCACTTCGTATACAAGGACGTCGAAGGACGACGACCCAGTGGGATGATATACAGAGAAAACTAGGTAATCTACCTCCAAAGCCCCCTACTTTCAAACCGCCTTCCTTCACTCCTTCTCAAGATGAAGATTCGAAACCCAGAGACAAGGCATGGATCGACGACAAAACCGAAGAAGAACTGGAAGATCTCGAAGACGATCCCGATCTCGATGACGATCGATTCCTCGAAGAATACAGGTTTTCTTTCAATTGGCTCTTACAGGAAGAGAGGCTGGCGGAGATGAGTGAAGCGGCTAGGGTTTCGAAGTTTGGATCAGTGATTCCGATATCGGGAGCGGATTTCGTTCGGGAGGTCTCGCAGGCTCCGCCTGATATTTGGGTGGTTGTGTTTCTGTACAAGGAAGGAATCCAAGTATGTGGGCTACTTTTACGGTGCCTGGAAGAACTAGCTACGAGATACCCAGCAACAAAATTTGTTAAAATAATATCTACTGACTGCATCCCGAACTACCCAGATCGCAATCTTCCTACTCTTCTGGTCTACAATAATAGTGCAGTCAAAGGAACTTATGTGGGCTTGCATCATTTTGGCCGGAGATGCACTACCGAAGGTGTTGCACTAGCTCTCTGCCAATCAGATCCTGTACTTAATGATGGTCAGGGTGGAAGTGACCCATCGGGAAAGGCTGTCCTTGAAGGAGTCCGCAAGAGGTTTATAGAGAAAGTTGTGACAGAGCATGAAGAGGATGAGGATGGGTATTCTAGTGATTAG 1668 0.455 MGRAPCCSGEHTGLKKGPWTHEEDQKLTSFLLLNPNTSWRLVPPKAGLLRCGKSCRLRWMNYLRPDIRRGNFTPDEENLIIQLHAAVGNKWSVIASQLPGRTDNEIKNLWNTRLRKILVLQGINPITHQPLCNPLLSDYVKQWVKSIESVIITSLTTTQSSTSYNNNNISSPINGPLDVSLLPFGSLPPQSCLLEGSFARPDIANSTSQYSTFNGESWVGETSQRNGSFIDDLTVDEGASLPSNLSDYILMDGNPFTFEGGLDLMESALYMELHGLVVFLVELRAREKRDLKFSINGGLPLRIQGRRRTTTQWDDIQRKLGNLPPKPPTFKPPSFTPSQDEDSKPRDKAWIDDKTEEELEDLEDDPDLDDDRFLEEYRFSFNWLLQEERLAEMSEAARVSKFGSVIPISGADFVREVSQAPPDIWVVVFLYKEGIQVCGLLLRCLEELATRYPATKFVKIISTDCIPNYPDRNLPTLLVYNNSAVKGTYVGLHHFGRRCTTEGVALALCQSDPVLNDGQGGSDPSGKAVLEGVRKRFIEKVVTEHEEDEDGYSSD* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00368 555 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Eupl04g00368 555 MobiDBLite consensus disorder prediction 318 351 - -
Eupl04g00368 555 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Eupl04g00368 555 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Eupl04g00368 555 SMART sant 15 65 IPR001005 -
Eupl04g00368 555 SMART sant 68 116 IPR001005 -
Eupl04g00368 555 SUPERFAMILY Thioredoxin-like 310 511 IPR036249 -
Eupl04g00368 555 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Eupl04g00368 555 CDD Phd_like_VIAF 311 511 - -
Eupl04g00368 555 FunFam MYB-related transcription factor 15 68 - -
Eupl04g00368 555 Gene3D - 9 68 - -
Eupl04g00368 555 PANTHER VIRAL IAP-ASSOCIATED FACTOR HOMOLOG 307 550 - -
Eupl04g00368 555 CDD SANT 71 114 IPR001005 -
Eupl04g00368 555 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Eupl04g00368 555 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Eupl04g00368 555 FunFam MYB transcription factor 70 131 - -
Eupl04g00368 555 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Eupl04g00368 555 Pfam Phosducin 365 490 IPR024253 -
Eupl04g00368 555 CDD SANT 18 63 IPR001005 -
Eupl04g00368 555 Gene3D Glutaredoxin 395 520 - -
Eupl04g00368 555 Gene3D - 71 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00368 Eupl-Chr4 6070085 6080794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00368 1 131 MYB Transcription Factor Family AT3G61250 66.412 7.32e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl04g00368 Phosducin 7.4e-09 CL0172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00368 - - nnu:104609871 389.423