Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00351 ATGACGGTCTTCGGACATACCGGCGGCGGATTTCTAGCCGGAAAGCAGGTTTTTCCAGTAGATTACGAAGCAGAGGTGTCTCAACGGCTTGTCGAAGCGTCGCACACTAGCGATCTGAAGTCGGCATTCGAATGCATCGGCGATCCATTCGTTGACGTGAACTTCATCGGCGCGGTTTGCTTGAAGACGAGGAAGACGGAAGTTGTGTTGCACGATGAATCGGCCGATGAAGTTCGGATCGAGTACGAAGAGTTCAAGACTGATGTCACGGCATTGTTTCTCGCTGTTCATGCCGGAAATCTGACACTCGTACGGAAACTACTGAGTGTAGGAGCCGACGTGAACCAAAAGCTTTTCAGAGGCTTTGCGACGACAGCAGCAGTGAGGGAGGGCCACCTCGAGATTTTGGAGATCCTGCTCAAGGCTGGAGCTTCGCAGCCGGCATGCGAAGAGGCTCTATTGGAGGCGAGCTGTCATGGACGGGCAAGGCTTGCTGAGCTGCTCATGGGGTCCGACATGATCCGGCCCCACGTTGCCGTGCATGCACTTGTCACGGCATGCTGCAGAGGCTTCGTGGATGTCGTAGACACGCTCATGAAGTGTGGAGTGGATGCAAATGCAACTGATCGCGTGCTGCTCCGGTCTTCCAAGCCTTCGCTGCACACCAATGCTGACTGTACGGCGCTCGTGGCAGCCATAGTTAGCAAGCAGGTCTCCGCTGTCCGCCAGTTATTACAGGTTGGCGTCAGAACGGACACCAAAGTGAGACTGGGAGCCTGGTCGTGGGATACGAATTCGGGCGAAGAGTTCAGGGTGGGTGCAGGATTAGCTGAGCCCTATGCCTTCACCTGGTGCGCAGTGGAGTATTTCGAAGCCAGTGGTGCAATCTTGCGCATGCTCCTCCAACACCATTCTCCCAACACCCCACACTATGGGAGGACCCTCATCCACCATGCCATCCTGTGTGGCAATGTCGGAGCACTTGATGTTTTGTTGAATTGCGGTGCTGATGTAGAGTTCATGGTGAAAACAGCCCGAAAAAATGAGTTCCGCCCAATACACATGGCTGCCCGACTTGGCTTAGACAGAATCGTACAGTGCCTGGTCAGTGCTGGCTGTGACCTCAATTCCCGGACGGAATCTGGCGACACAGCACTGATGATCTGCACGAAATATAAACGGGATGAGTGCCTCCAAGTTCTCGCTTCGGCTGGTGCTGATTTTGGTCTTGTCAATAGGACTGGTCAGTGTGCCAGCTCAATTGCTGGGTCACACAGATGGAGCCTGGGTTTCCAACATGCTGTGCTAGACATAATTAGCTCTGGGAAGGTTGTTAGATCGAGCAATGTATCTGTCTTTTCTCCTCTAATGTTCGTTGCTCGCACAGGCAATATTGATGCCTTGAAAGCACTGATCGAGCATCCGGACATTAGCCTTGACGATCAGGATGATAAAGGGTTCTCAGCGGTCATGGTTGCTGCTATAGAAGGTCATGTGGAAGCATTCCGGTTGCTTGTCTACGCAGGGGCTGATGTGAAGCTGTTCAACAAATCTGGTGAGACAGCTATCAGCTTATCGGAATTAAACCAGAACCGCGATCTCTTTGAGAAAGTATTACTTGAATTTGCTCTTGAAAAGGGTAACCATGGCGCTGGAGGATTCTATGTGCTACATTGCGCGGCTCGCCGTGGGGACATGGCTGCAGTGCGCCTATTAACACGTCGGGGCTATGACGTCAATGTCCCGGAAGGAGATGATTACACCCCACTTATGTTAGCAGCAAGAGAAGGCCATGGAAGCATGTGTGAGCTCCTGATTTCATGTGGAGCCAGATGTGACCTAAAGACTGCAAGAGGCGAGACTGCACTATCGCTTGCAAGAAAGAACGGTGGTATTGGAGGCGATGCAGAGCGTGTGATACTTGATGAGCTCGCTCGTACACTCGTGTTAAATGGGGCCCGTGTGCAGAAACACACCAAGGGAGGAAAGGGTGCACCGCATGGGAAGGCGATGAGGATGGTTGGGGCTGCAGGAGTGTTGCGGTGGGGGAAGTCAAGTAAGAGGAACGTAGTTTGTAGGGAAGCAGAGGTGGGGGCAAGCTCAGTGTTCCGGAGGAACCGCAGGAGGAAGGGTGACGCAGATGAGGCAGGAGTGTTTAGAATAGTGACTACAAAGAACAAGGAGGTACATTTCATATGTGACGGTGGGGTTGAAGCTGCGGAGCTGTGGGTAAGGGGGATCAAACTTGTGACTAGGGAGGCTATTTTTGGTAGGAAGCAGTGTGAGACGTGA 2292 0.5266 MTVFGHTGGGFLAGKQVFPVDYEAEVSQRLVEASHTSDLKSAFECIGDPFVDVNFIGAVCLKTRKTEVVLHDESADEVRIEYEEFKTDVTALFLAVHAGNLTLVRKLLSVGADVNQKLFRGFATTAAVREGHLEILEILLKAGASQPACEEALLEASCHGRARLAELLMGSDMIRPHVAVHALVTACCRGFVDVVDTLMKCGVDANATDRVLLRSSKPSLHTNADCTALVAAIVSKQVSAVRQLLQVGVRTDTKVRLGAWSWDTNSGEEFRVGAGLAEPYAFTWCAVEYFEASGAILRMLLQHHSPNTPHYGRTLIHHAILCGNVGALDVLLNCGADVEFMVKTARKNEFRPIHMAARLGLDRIVQCLVSAGCDLNSRTESGDTALMICTKYKRDECLQVLASAGADFGLVNRTGQCASSIAGSHRWSLGFQHAVLDIISSGKVVRSSNVSVFSPLMFVARTGNIDALKALIEHPDISLDDQDDKGFSAVMVAAIEGHVEAFRLLVYAGADVKLFNKSGETAISLSELNQNRDLFEKVLLEFALEKGNHGAGGFYVLHCAARRGDMAAVRLLTRRGYDVNVPEGDDYTPLMLAAREGHGSMCELLISCGARCDLKTARGETALSLARKNGGIGGDAERVILDELARTLVLNGARVQKHTKGGKGAPHGKAMRMVGAAGVLRWGKSSKRNVVCREAEVGASSVFRRNRRRKGDADEAGVFRIVTTKNKEVHFICDGGVEAAELWVRGIKLVTREAIFGRKQCET* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat profile. 87 119 IPR002110 GO:0005515
Eupl04g00351 763 SUPERFAMILY Ankyrin repeat 87 339 IPR036770 -
Eupl04g00351 763 Gene3D - 72 263 IPR036770 -
Eupl04g00351 763 Gene3D - 429 542 IPR036770 -
Eupl04g00351 763 Gene3D - 280 344 IPR036770 -
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat region circular profile. 585 610 - -
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat region circular profile. 552 581 - -
Eupl04g00351 763 PANTHER ANKYRIN REPEAT-CONTAINING 24 744 - -
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat region circular profile. 348 380 - -
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat profile. 311 343 IPR002110 GO:0005515
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat profile. 585 617 IPR002110 GO:0005515
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat region circular profile. 485 517 - -
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat region circular profile. 87 115 - -
Eupl04g00351 763 Gene3D - 345 428 IPR036770 -
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat profile. 485 517 IPR002110 GO:0005515
Eupl04g00351 763 SUPERFAMILY Ankyrin repeat 308 663 IPR036770 -
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat region circular profile. 311 339 - -
Eupl04g00351 763 Gene3D - 543 673 IPR036770 -
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat profile. 552 584 IPR002110 GO:0005515
Eupl04g00351 763 ProSiteProfiles Ankyrin repeat profile. 348 380 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 118 148 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 348 377 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 178 207 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 585 614 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 311 340 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 87 116 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 224 255 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 552 581 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 451 481 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 485 514 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 381 410 IPR002110 GO:0005515
Eupl04g00351 763 SMART ANK_2a 618 657 IPR002110 GO:0005515
Eupl04g00351 763 Pfam Ankyrin repeats (3 copies) 557 630 IPR002110 GO:0005515
Eupl04g00351 763 Pfam Ankyrin repeats (3 copies) 454 515 IPR002110 GO:0005515
Eupl04g00351 763 Pfam Ankyrin repeats (3 copies) 92 170 IPR002110 GO:0005515
Eupl04g00351 763 Pfam Ankyrin repeats (3 copies) 348 409 IPR002110 GO:0005515
Eupl04g00351 763 Pfam Ankyrin repeat 311 339 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00351 478 667 Ion Channels AT2G25600 25.773 8.79e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00351 - - nnu:104591671 1255.35