Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00348 ATGGAGTTCTCTCGCCTGTTTCTGATGGTATGTCTTTCATGGTTTTTCTTCATTCCTGGTACCCATCAATTGCAAACCTCTCAGACCCAAGTTCTTCAGCAGCTACGGAAATATTTGGAATACCCAACACCATTGGAAGTTTGGAATAATTACCATGGAGACCTCTGCTACTCGCCTTCTTCCTCACAGATAAGCATCTCATGCCAAGACAACTCTGTTGCCGAGCTCAAAATTATGGGGGAAAAGCCTTCCAAGGGTAGTAAGTTTGAAGGCTTTCCGATTCCCAATCAGACTCTATCAGAGGGATTCTCCATTGAGTCTTTTGTCACAACTCTGTCGAGGCTTACCAGCTTGAGAGTTCTTAGTTTGGTATCTCTGGGTATTTGGGGGCCACTCCCTGACAAAATCCATCGGTTATATTCGCTTGAATTCCTCGATTTGAGTTCGAATTTTCTATATGGTTCAATCCCTCCTAAGATTTCTGCCATGGTAAAGCTTCAAATTTTGACACTGGATGGCAATTTCTTAAATGATACTGTCCCTGATTGGTTTGATTCATTATCGAATTTGACGATTTTGAGCGTGAAGAGCAACCGGTTGAAGGGTCCCTTCCCTTCTTCAATTGGCAGAATTAATACGCTCACTGATCTTGCGTTATCTCACAATGAGATTTCTGGGAAATTACCTGATCTGGGTAGCTTAACTAGCCTACACGTATTGGATTTGAGAGAGAACCAGATAGACTCTGAACTACCTGTCATGCCTAAAGGGTTGGTCACAGCTCTTCTCAGCAAGAATTCCTTCTCCGGTGAGATTCCACAACAATTTGGTGAGCTGAAACAGCTTCAACACCTCGATCTGTCATTCAATTTCCTCCAAGGAACACCTCCTGCAGCACTGTTCTCTTTGCCAAATATCAGTTATCTGAATTTGGCTTCTAATATGCTTACTGGATCGCTTCCTAACCATCTAAGCTGTGGTAGCGTACTTGGATTTGTGGATATTTCTACTAACAGATTAACAGGGGGATTGCCTTCTTGCTTGAGTTCGACATCAGAAAAGAGACTTGTTAAGTTTGGTGGGAATTGCTTGTCTGTTGATCCACAGCATCAGCATCAGAAGTCGTATTGCAAAGAATTCCATGCAAAGACGGAACAATCTGGGTCTGGGGGCAAAGGTGTAGGAGTACTAGTTGGTGTCATTTTAGGAATTGTTATTGTCATGGTACTTCTATTGTTCGGGTTTCTCATTTTTTGTAGAAGATATTGTCCACGAGGGACATCTGAGCAGCATTTATTGCCAAAGGTGCAAGATAACTTGGCAACAGGATTCTCCTCTGAGGTTCTTGCAAACGCAAGGTTTATCTCTCAAGCAGTGAAGGTAGGGACACAAGGTGTCCCAATATATCGGTTGTTTTCCATAGAAGAATTAAGGGAAGCCACAAACAACTTTGATCAGTCAACATTTATGGGTGAAGGTTCAATTGGAAAGCTCTACAAGGGAAAATTGGAGAACGGGACCTATGTAGCCATAAGGTGTTTGGCATTGTTTAAGAGATATTCAATTCGAAACCTTAAACTTCGGTTGGATTTACTTTCGAAGCTTCGCCACCCACATTTGGTTTGCCTTTTGGGGCACTGCATTGATGGTGGCGAACGAGATGATTCCAGTGTCAACAGAGTCTTTCTTATATATGAATATGTGTTCAATGGGAATCTTCATACTCATCTCTCAGAGAATAGTCCGGAGAAGGTCCTTAAATGGTCAGATAGATTGACAGTTTTAATTGGTATTGCCAAGGCTGTGCACTTTCTACATAGTGGAATAATTCCCGGTTTCCTCAACAACAGATTGAAAACAACTAATATTTTGCTCGATGAGCATCGGATTGCCAAACTGAGTGACTATGGGTTGTCTATTATCACAAAAGAAATCGACAAACTTGAGGCGCAGGGGGAAGGCAAGAAGTCACGGCAAATGACAAAATTAGAGGATGATGTTTATAGCTTTGGTTTCATACTACTTGAAATGCTTGTCGGACCTATGACGTCCGGAAGAGGAGAAGCATTTCTGCTCAATGAAATGGCATCATTCGGCAGTCAGGATGGTCGAAGACGAATTGTGGACCCAATTGTACTCACCACTTGCTCCCAAGAATCTTTATCGACTGTGATCTCAATAACGAACAAATGCATATCTACCGAATCATCGACCCGTCCCTCTTTCGAAGACGTCCTTTGGAACTTACAGTACGCAGCTCAAGTCCAGGCAACAGCAGATGGTGATCAGAGATCAGATGTTGCATCACAACCATGA 2316 0.4257 MEFSRLFLMVCLSWFFFIPGTHQLQTSQTQVLQQLRKYLEYPTPLEVWNNYHGDLCYSPSSSQISISCQDNSVAELKIMGEKPSKGSKFEGFPIPNQTLSEGFSIESFVTTLSRLTSLRVLSLVSLGIWGPLPDKIHRLYSLEFLDLSSNFLYGSIPPKISAMVKLQILTLDGNFLNDTVPDWFDSLSNLTILSVKSNRLKGPFPSSIGRINTLTDLALSHNEISGKLPDLGSLTSLHVLDLRENQIDSELPVMPKGLVTALLSKNSFSGEIPQQFGELKQLQHLDLSFNFLQGTPPAALFSLPNISYLNLASNMLTGSLPNHLSCGSVLGFVDISTNRLTGGLPSCLSSTSEKRLVKFGGNCLSVDPQHQHQKSYCKEFHAKTEQSGSGGKGVGVLVGVILGIVIVMVLLLFGFLIFCRRYCPRGTSEQHLLPKVQDNLATGFSSEVLANARFISQAVKVGTQGVPIYRLFSIEELREATNNFDQSTFMGEGSIGKLYKGKLENGTYVAIRCLALFKRYSIRNLKLRLDLLSKLRHPHLVCLLGHCIDGGERDDSSVNRVFLIYEYVFNGNLHTHLSENSPEKVLKWSDRLTVLIGIAKAVHFLHSGIIPGFLNNRLKTTNILLDEHRIAKLSDYGLSIITKEIDKLEAQGEGKKSRQMTKLEDDVYSFGFILLEMLVGPMTSGRGEAFLLNEMASFGSQDGRRRIVDPIVLTTCSQESLSTVISITNKCISTESSTRPSFEDVLWNLQYAAQVQATADGDQRSDVASQP* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00348 771 ProSiteProfiles Protein kinase domain profile. 484 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00348 771 SUPERFAMILY Protein kinase-like (PK-like) 466 749 IPR011009 -
Eupl04g00348 771 SUPERFAMILY L domain-like 28 368 - -
Eupl04g00348 771 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 97 750 - -
Eupl04g00348 771 ProSiteProfiles Leucine-rich repeat profile. 213 235 IPR001611 GO:0005515
Eupl04g00348 771 Gene3D Transferase(Phosphotransferase) domain 1 569 769 - -
Eupl04g00348 771 SMART LRR_typ_2 234 257 IPR003591 -
Eupl04g00348 771 SMART LRR_typ_2 139 163 IPR003591 -
Eupl04g00348 771 SMART LRR_typ_2 279 302 IPR003591 -
Eupl04g00348 771 SMART LRR_typ_2 303 327 IPR003591 -
Eupl04g00348 771 Gene3D Ribonuclease Inhibitor 260 366 IPR032675 -
Eupl04g00348 771 Gene3D Ribonuclease Inhibitor 25 257 IPR032675 -
Eupl04g00348 771 Pfam Protein tyrosine and serine/threonine kinase 489 747 IPR001245 GO:0004672|GO:0006468
Eupl04g00348 771 Gene3D Phosphorylase Kinase; domain 1 449 567 - -
Eupl04g00348 771 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 258 382 - -
Eupl04g00348 771 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Eupl04g00348 771 Pfam Leucine rich repeat 263 316 IPR001611 GO:0005515
Eupl04g00348 771 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 447 567 - -
Eupl04g00348 771 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 568 768 - -
Eupl04g00348 771 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 25 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00348 Eupl-Chr4 5696976 5704345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00348 1 697 Miscellaneous Gene Families AT5G14210 59.291 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Eupl04g00348 PK_Tyr_Ser-Thr 7.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00348 - - nnu:104592932 1113.6