Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00338 ATGTCGATTTCGGGTCGTTCGTTCGGCGTACCTGGGGATGGAAGATGTCTGTTCCGGTCTGTCGCTCATGGGGCACGCTTGAGAGAAGGAAAGCCATCTCCAAGTGAGAGCCTTCAAAAAGAACTAGCAGATGTGCTCAGAGCCAAAGTTGCAGATGAGTTCATTAAGAGGCGTGCAGACACTGAATGGTTTCTTGAAGGTGATTTTGATACATACGTTATGCAGATGAGACAGCCTCACATTTGGGGAGGAGAACCCGAGCTGCTCATGTCCTCACATGTACTGCAGATGCCCATCAATGTCTACATGAGGGATAAAGACTCTGGAGACCTCAAAATTATAGCAGAATATGGTCAAGAGTATGGGAAGGAAAATCCTATCCGTGTTCTTTATCATGGTTATGGACACTATGATGCATTGCAGAGCCCTTTCGGTGGACAACAATCCAAGTTGTACAAGAAAAGATGA 468 0.4615 MSISGRSFGVPGDGRCLFRSVAHGARLREGKPSPSESLQKELADVLRAKVADEFIKRRADTEWFLEGDFDTYVMQMRQPHIWGGEPELLMSSHVLQMPINVYMRDKDSGDLKIIAEYGQEYGKENPIRVLYHGYGHYDALQSPFGGQQSKLYKKR* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00338 155 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 10 143 - -
Eupl04g00338 155 Pfam OTU-like cysteine protease 11 137 IPR003323 -
Eupl04g00338 155 ProSiteProfiles OTU domain profile. 5 143 IPR003323 -
Eupl04g00338 155 SUPERFAMILY Cysteine proteinases 8 141 IPR038765 -
Eupl04g00338 155 CDD OTU_plant_OTU4-like 9 141 - -
Eupl04g00338 155 FunFam OTU domain-containing protein 2 147 - -
Eupl04g00338 155 Gene3D - 6 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00338 Eupl-Chr4 5392427 5398953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00338 10 148 C2H2 Transcription Factor Family AT1G50670 28.571 2.23e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00338 K18342 - pvy:116126447 264.233