Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00333 ATGAAGCTCTTTCTACTCTTCTTTCTCTTTCTGCAACTCCAAAACCCTAACCTTGCTTTCTCTCTCTCCCCCGACGGTCTTTCTCTCCTCGCGCTTAAATCCGCCGTCGATCAGTCATCAGACAGTTCCCCATTCTCCGACTGGAACGAGAACGACACTAACCCATGCCATTGGTCTGGAATTTCATGCATGAACATTACCGGATTCCCCGATCCTCGCGTCGTCGGAATCGCCATCTCCGGCAAGAATCTCCGTGGTTACATACCGTCTGAGCTCGGAACCCTTATTTTTCTCCGGCGATTGAACCTCCATGGCAATCGGTTCTACGGATCCATCCCTGTTCAGCTCTTCAATGCTTCGTCTCTACACAGTCTATTTCTGTACGGTAACAATCTCTCTGGTCCTCTCCCGCCTTCGATCTGCCATCTTCCTCGGCTTCAGAACCTCGATCTTTCCAGAAATTCGCTTTCCGGTAATATTTCGTCTGATCTTGAGAATTGCCGGCAGTTGCAGCGTTTGATTCTCGCCGGAAACAAGTTTTCCGGAGAGATTCCGACCGGAATTTGGCCGAAGCTGGAGAATTTGGTTCAACTCGATCTATCGTCTAACGAATTCAACGGATCGATTCCGGCGGATCTCGGAGAGCTTAAATCACTATCCGGAACGCTGAACCTCTCGTTCAATCATTTCTCCGGCGGGATCCCGAGATCGCTCGGGAAACTGCCGGTGACTGTGAGTTTCGATCTTCGAAACAACAATCTCACCGGAGAAATCCCTCAGAGTGGAACGTTTGCGAATCAAGGCCCGACCGCATTCCTTAACAATCCCTCACTTTGCGGCTTTCCTCTCCAGAAACCTTGTCGGAATCCTCCTCAGAGTCCCACAGGAAGTCAGATTCCGGCTCGGTTACCTGACACCAATTCAAAGAAAGGCTTAAAACCAGCTGTAATCATCTTAATTTCAGTAGCTGACGCAGCCGGAGTCGCACTTATCGGTATGATCATCGTTTATATATACTGGAAGAGGAAGGATTCGAAGAACTGCAGCTGCACTGGAAAAAGCAAATTAGGTGGCGGCGGAGGCGGGAAAATCTGTTCATTCTGTTTCTGCTCTTGTTTGAATGGGCTTCCAAGAAATGAATCGGAATTGGAGTCGGAGAAAGGCGGAGAGAATGGTGGGGAGGGCGAGCTGGTTGCGATCGATAAAGGGTTTATATTCGAACTAGACGAGCTTTTGAGAGCGTCAGCTTATGTTCTGGGGAAGAGCGGATTGGGAATTGTGTATAAGGTGGTGTTGGGTAATGGAGTGCCGGTGGCGGTGAGGAGATTGGGAGAAGGCGGAGGACAGAGGTATAAGGAATTTGCGACCGAGATACAGGCGATCGGACGAGTTAAGCATCCGAACATTGTGACATTGAGGGCCTATTACTGGGCTCCTGATGAAAAGCTTCTCATCTCTGATTTTATCTCTAATGGCAACTTGGGTTCTGCTCTTCGTGGGCGAACTGGTCAACCATCACCGAGTCTTTCCTGGTCCACTCGCCTAAGAATTGCCAAGGGAACAGCCCGTGGCCTGGCATACCTCCACGAATGCAGCCCAAGAAAATTCGTCCATGGGGACATCAAACCCTCCAACATCCTCCTCGATGCTGAATTCCATCCATATCTATCGGATTTTGGTCTCAACCGACTGATAAGTATCACCGGCAATGAGCCCAACTCCTCCGGTGGTTTCATTGGTGGAGCAATCCCGTATGTCAAGCCTGTCCAATCTGAGCGTGCCAGCAATTACAGGGCCCCCGAGGCCCGGGTACCCGGTATTAATCGGCCCACCCAGAAATGGGACATATACTCATTTGGGGTTGTATTGCTTGAATTGCTGACAGGGAAATCTCCAGAATTTTCGTCTCCAACCACATCGTCGTCGGTCGAAGTGCCAGATTTGGTGAGGTGGGTGAGGAAGGGATTTGAAGAGGAGAACCCGTTGTCAGAGATGGTAGACCCAATGTTACTCCAGGAGGTGCATGCAAAGAAGGAGGTGCTGGCAGTATTCCATGTAGCCCTAGCATGCACTGATGCTGACCCGGAGGTGCGGCCGAGGATGAAGACGGTCTGCGATAATCTTGATAGGATCGGGGACGTAAAATGA 2148 0.5028 MKLFLLFFLFLQLQNPNLAFSLSPDGLSLLALKSAVDQSSDSSPFSDWNENDTNPCHWSGISCMNITGFPDPRVVGIAISGKNLRGYIPSELGTLIFLRRLNLHGNRFYGSIPVQLFNASSLHSLFLYGNNLSGPLPPSICHLPRLQNLDLSRNSLSGNISSDLENCRQLQRLILAGNKFSGEIPTGIWPKLENLVQLDLSSNEFNGSIPADLGELKSLSGTLNLSFNHFSGGIPRSLGKLPVTVSFDLRNNNLTGEIPQSGTFANQGPTAFLNNPSLCGFPLQKPCRNPPQSPTGSQIPARLPDTNSKKGLKPAVIILISVADAAGVALIGMIIVYIYWKRKDSKNCSCTGKSKLGGGGGGKICSFCFCSCLNGLPRNESELESEKGGENGGEGELVAIDKGFIFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGGQRYKEFATEIQAIGRVKHPNIVTLRAYYWAPDEKLLISDFISNGNLGSALRGRTGQPSPSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDAEFHPYLSDFGLNRLISITGNEPNSSGGFIGGAIPYVKPVQSERASNYRAPEARVPGINRPTQKWDIYSFGVVLLELLTGKSPEFSSPTTSSSVEVPDLVRWVRKGFEEENPLSEMVDPMLLQEVHAKKEVLAVFHVALACTDADPEVRPRMKTVCDNLDRIGDVK* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00333 715 Gene3D Transferase(Phosphotransferase) domain 1 489 715 - -
Eupl04g00333 715 FunFam Leucine-rich repeat receptor-like protein kinase 194 289 - -
Eupl04g00333 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Eupl04g00333 715 Gene3D Phosphorylase Kinase; domain 1 406 488 - -
Eupl04g00333 715 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 143 712 IPR046959 -
Eupl04g00333 715 SMART LRR_typ_2 95 119 IPR003591 -
Eupl04g00333 715 SMART LRR_typ_2 192 216 IPR003591 -
Eupl04g00333 715 SMART LRR_typ_2 143 167 IPR003591 -
Eupl04g00333 715 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
Eupl04g00333 715 Gene3D Ribonuclease Inhibitor 188 288 IPR032675 -
Eupl04g00333 715 FunFam Leucine-rich repeat receptor-like protein kinase 23 186 - -
Eupl04g00333 715 ProSiteProfiles Protein kinase domain profile. 413 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00333 715 CDD STKc_IRAK 419 711 - -
Eupl04g00333 715 Pfam Leucine rich repeat 98 156 IPR001611 GO:0005515
Eupl04g00333 715 SUPERFAMILY Protein kinase-like (PK-like) 418 708 IPR011009 -
Eupl04g00333 715 SUPERFAMILY L domain-like 29 284 - -
Eupl04g00333 715 SMART serkin_6 417 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00333 715 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Eupl04g00333 715 Pfam Protein kinase domain 418 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00333 715 FunFam Os07g0541700 protein 501 576 - -
Eupl04g00333 715 FunFam Leucine-rich repeat receptor-like protein kinase 396 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00333 Eupl-Chr4 5310945 5315943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00333 15 711 Receptor kinase-like Gene Family AT1G67510 70.308 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl04g00333 Pkinase 1.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00333 - - nnu:104591684 1120.92