Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00319 ATGGAGGAGAATTCAAGCAAACATGAAGAATCAGCAACAATCCATAACATGGAAGGAGAAGCAGAGGAAGAAAGAGACCCGGAGAGCAACTCTCTGCATCAGCCACTCTTAAAAAGAAACAGAACACTCTCCTCCAACCCTTTAGCAATTGTTGGAGCCAAGGTTTCTCATATAGAGAGCTTGGACTATGAGATCAATGAGAATGATCTCTTTAAACATGATTGGAGAAGCAGATCCACAGTTCAAGTCCTGCAGTATATTTTCTTGAAATGGACACTGGCTTTCCTTGTTGGACTTCTAACTGGAGTTATTGCCACCCTCATCAACCTTGCAATCGAGAACATTGCCGGATACAAGCTTCTCTCAGTCGCCCGCTTGGTCGAGAAAAAAAGGTATGTTATGGGGTTCATCTATTTAACTGGGACTAATCTGGCTCTTACCTTGGTTGCTGCTGTTCTCTGTGTGGGGTTTGCACCTACTGCGGCTGGACCGGGTATACCCGAGATCAAAGCTTATCTCAATGGAGTTGATACACCCAACATGTTTGGAGCTTCAACATTGATAGTCAAGATCATTGGAAGCATTGGAGCTGTTTCTGCTGGTCTAGATCTAGGAAAAGAAGGGCCACTGGTGCACATCGGTGCCTGCCTTGCTTCCTTGCTAGGCCAAGGTGGACCAGCCAATTATCGCCTTAAATGGCCCTGGCTACGCTACTTCAACAACGACAGGGATCGCAGAGATCTTATCACCTGTGGGGCAGCTTCTGGTGTCTGTGCTGCTTTTCGGGCACCAGTAGGTGGCGTCCTGTTTGCTCTCGAAGAGGTAGCTACATGGTGGAGGAGTGCCCTGCTTTGGAGAACTTTCTTCAGCACTGCTGTGGTGGTGGTAGTTCTCAGAGCATTCATTGAGTACTGCAACTCTGGAAACTGCGGACTTTTCGGGAAAGGAGGCCTTATCATGTTTGATGTGAGCAATGTTACTGTTAGCTACCATGCTATGGATCTTGTTCCTGTTGTTATAATTGGTGTTTTCGGTGGTGTTTTGGGAAGCCTATACAACTATCTTCTCCACAAGGTCCTCAGGCTCTACAATCTCATTAATGAGAAGGGAAGAGTGCACAAGGTGGTCCTCAGTCTTACTGTCTCCCTGTTCACCTCTGTCTGCCTTTACTGCCTCCCTTTCCTCGCCCGTTGCTCGCCCTGTGATCCCTCCCTTTCTGATTCCGCCTGCCCCACCAATGGACGGACGGGCAACTTCAAGCAATTCAACTGCCCATCCGGCTACTACAACGACTTAGCCAGTCTCCTCCACACCACCAACGATGACGCTGTCCGAAACATCTTCTCCACCTCCACCCCAACGGAATTTCACCCATTCTCCCTCTTCATTTTCTTTGCACTCTATTGCATATTGGGTCTCTTCACTTTCGGCATCGCTGTCCCATCTGGTCTCTTCCTACCCATCATCCTCATGGGTTCAGCCTATGGTCGCTTGCTTGGCCTCGCTATGGGGTCCTACACGAACATCGACCAGGGGCTTTATGCTGTCCTTGGTGCTGCCTCCCTCATGGCAGGCTCCATGAGGATGACTGTCTCTCTCTGTGTCATCTTCCTCGAGCTCACCAACAACCTCCTCCTACTCCCCATAACCATGCTTGTCCTACTCATTGCTAAAACTGTTGGAGACTGCTTCAACCCAAGTATCTATGAGATCATCCTGCACCTCAAAGGCCTACCTTTCTTGGATGCCCATGCAGAACCATGGATGAGGAACCTCACTGTTGGTGAGCTTGCTGATGCCAAACCAGCTGTAGTCACCCTCAGCGGTGTGGAGAAGGTGGGCCGTATTATTGATGTCTTGCGAAACACTACCCACAATGGCTTCCCTGTTGTTGACCAAGGGGTGGTGTCGCCGGAGGGGCTACCCATTGGGGTAATAGAACTTCATGGACTGATTTTGAGAGCACACCTCATTGCAGTGCTAAGGAAGAAGTGGTTCCTGAAAGAAAGGAGGAGAACAGAGGAATGGGAAGTAAGGCAGAACTTTACCTCGGCCGATCTGGCAGAGAGGGGTAGAAATATTGATGAGGCAGAAGTGACGGAGGATGAGATGGAAATGTATGTAGACTTACATCCTCTCATCAACACCACCCCATACACAGTGGTGGAAAGCATGTCAGTGGCGAAAGCTATGGTGCTCTTCCGGCAGGTCGGGCTCCGCCATTTGCTGATTGTACCCAAGATTCAAGCAGCCGGGGTCTCTCCTGTGCTGGGGATCTTGACCAGGCAAGATTTGAGGGCCCACAACATTTTGAGTGCCTTTCCTCATCTAGCAAAAAGCAGGGAAAGAGAAAAGAGAAAGTGA 2364 0.4937 MEENSSKHEESATIHNMEGEAEEERDPESNSLHQPLLKRNRTLSSNPLAIVGAKVSHIESLDYEINENDLFKHDWRSRSTVQVLQYIFLKWTLAFLVGLLTGVIATLINLAIENIAGYKLLSVARLVEKKRYVMGFIYLTGTNLALTLVAAVLCVGFAPTAAGPGIPEIKAYLNGVDTPNMFGASTLIVKIIGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPANYRLKWPWLRYFNNDRDRRDLITCGAASGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEYCNSGNCGLFGKGGLIMFDVSNVTVSYHAMDLVPVVIIGVFGGVLGSLYNYLLHKVLRLYNLINEKGRVHKVVLSLTVSLFTSVCLYCLPFLARCSPCDPSLSDSACPTNGRTGNFKQFNCPSGYYNDLASLLHTTNDDAVRNIFSTSTPTEFHPFSLFIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRLLGLAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLIAKTVGDCFNPSIYEIILHLKGLPFLDAHAEPWMRNLTVGELADAKPAVVTLSGVEKVGRIIDVLRNTTHNGFPVVDQGVVSPEGLPIGVIELHGLILRAHLIAVLRKKWFLKERRRTEEWEVRQNFTSADLAERGRNIDEAEVTEDEMEMYVDLHPLINTTPYTVVESMSVAKAMVLFRQVGLRHLLIVPKIQAAGVSPVLGILTRQDLRAHNILSAFPHLAKSREREKRK* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00319 787 MobiDBLite consensus disorder prediction 1 32 - -
Eupl04g00319 787 FunFam Chloride channel ClC3 82 398 - -
Eupl04g00319 787 Pfam Voltage gated chloride channel 147 561 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl04g00319 787 Gene3D Clc chloride channel 81 583 - -
Eupl04g00319 787 PRINTS Plant CLC chloride channel signature 432 448 IPR002251 GO:0005247|GO:0006821|GO:0016020
Eupl04g00319 787 PRINTS Plant CLC chloride channel signature 275 283 IPR002251 GO:0005247|GO:0006821|GO:0016020
Eupl04g00319 787 PRINTS Plant CLC chloride channel signature 64 72 IPR002251 GO:0005247|GO:0006821|GO:0016020
Eupl04g00319 787 PRINTS Plant CLC chloride channel signature 307 314 IPR002251 GO:0005247|GO:0006821|GO:0016020
Eupl04g00319 787 PRINTS Plant CLC chloride channel signature 289 299 IPR002251 GO:0005247|GO:0006821|GO:0016020
Eupl04g00319 787 SUPERFAMILY CBS-domain pair 585 767 IPR046342 -
Eupl04g00319 787 Gene3D - 601 766 IPR046342 -
Eupl04g00319 787 PRINTS Chloride channel signature 159 176 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl04g00319 787 PRINTS Chloride channel signature 512 528 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl04g00319 787 PRINTS Chloride channel signature 480 500 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl04g00319 787 PRINTS Chloride channel signature 254 273 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl04g00319 787 PRINTS Chloride channel signature 530 549 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl04g00319 787 PRINTS Chloride channel signature 190 209 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl04g00319 787 PRINTS Chloride channel signature 568 582 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Eupl04g00319 787 CDD ClC_6_like 59 581 - -
Eupl04g00319 787 SMART cbs_1 717 770 IPR000644 -
Eupl04g00319 787 SMART cbs_1 603 656 IPR000644 -
Eupl04g00319 787 CDD CBS_pair_voltage-gated_CLC_euk_bac 584 768 - -
Eupl04g00319 787 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 16 772 - -
Eupl04g00319 787 SUPERFAMILY Clc chloride channel 68 584 IPR014743 -
Eupl04g00319 787 ProSiteProfiles CBS domain profile. 714 780 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00319 Eupl-Chr4 5013076 5017535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00319 23 781 Ion Channels AT3G27170 80.105 0.0 1246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00319 K05016 - aew:130776866 1304.27