Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00308 ATGCACGCCAAGATGATCAGAATCCTCGTGTTATTATCAACGTTCCTCCTCCTATTGTACCGCATTTTACGTAGATTCCGGCAAGTGTATGGTCCACCCACATACCCTTTCATCGGATGCTTGATCTCCTTCTACAACAATCGATACCGTCTGTTAGACTGGTACACCGATCTCCTCACTGACTCGCCGACGCAGACGATCGTGGTGCACCGTTTCGGTGCACGAAGGACCATCATCACGGCGAACCCCGACAACGTTGAGTACATCTTAAGGACAAACTTCAATAACTTTCCAAAGGGTAAACCTTTCACTGAAATCCTCGGTGACTTTCTAGGGCGTGGCATCTTCAACGTGGATGGAGATCTCTGGCGCACCCAGCGTAAGTTAGCAAGTCACGAGTTTACCACCAAGTCCTTGCAAGTGTACCTTGTAGAGACGTTGAAGGATGAGGTGGAGAAGCGGTTGTTGCCGATACTAGAGTCGACGATGGAAACTAATAAAGTTGTGGATTTACAAGAATTGTTAAGGCGGTTCGCTTTCGACACGATATGCAAGGTGTCGTTAGGGACTGATCCGGGTTGTTTAGATCCTTCGCTGCACGTGTCGCCTCTTGCGAGAGCCTTCGACGTTGCCTCAGAGATAAGCGCGAAGCGTGCAGCGGCGCCTGTTTTCGCTATATGGAAGATTAAGCGCGCGTTGCTTGTTGGGTCCGAGAAGCGACTCAAGGAAGCAATTAAACACGTACGTGAATCAGTCGTAGAGATTATTCAGAATAAGAGGAAGAAGCTTAAAGAAGAGGGAGGAGAGAGCAAGGAGGGGGATCTTCTGTCTCGGTTTATATCAGACGGTCACGATGAGGAGGTTATCATAGATATGGTAATAAGCTTCATGATGGCGGGAAGGGATACGACGTCGGCAGCGATGACGTGGCTCTTCTGGTTGCTTTCCTGCCATCCCAAAATAGAGGAAGAGGTGGTGAAGGAAGTGAAAACGTTTAATGAGAGACTATTAGATTACGAAGCGTTGAAGGAGATGAGATTCCTGAAGGCTTGTCTGTGTGAATCGATGAGGCTCTACCCACCGGTTGCCTGGGATTCCAAGCACGCTGTCGTCAACGACACGCTGCCGGACGGTACGGCTGTTCGGACGGGAGATAGGGTGACGTATTTCCCTTATGGAATGGGGAGGATGGAAGGGTTGTGGGGGAAGGACCGGCTCGAGTTCAAACCCGATAGGTGGTTTGTTGAACCGGGCAACGAGCGGGGAGAGTTGAAGAAGGTGTGTCCGTACAAGTTTCCAGTGTTTCAAGCTGGGCCGAGAGTTTGTCTTGGGAAGGAGATGGCTTTTATTCAGATGACGTACATGGTTGCTTCGATACTGAGCCGGTTCGAGCTCAGACCAGTCGATCTGGGCCGGCCTATATTTGTTCCTCTCCTGACCGCTCACATGGCCGGCGGGCTCAAGGTTTTGGTCCGGCCGCGCTCGAGAGAGTGA 1494 0.5074 MHAKMIRILVLLSTFLLLLYRILRRFRQVYGPPTYPFIGCLISFYNNRYRLLDWYTDLLTDSPTQTIVVHRFGARRTIITANPDNVEYILRTNFNNFPKGKPFTEILGDFLGRGIFNVDGDLWRTQRKLASHEFTTKSLQVYLVETLKDEVEKRLLPILESTMETNKVVDLQELLRRFAFDTICKVSLGTDPGCLDPSLHVSPLARAFDVASEISAKRAAAPVFAIWKIKRALLVGSEKRLKEAIKHVRESVVEIIQNKRKKLKEEGGESKEGDLLSRFISDGHDEEVIIDMVISFMMAGRDTTSAAMTWLFWLLSCHPKIEEEVVKEVKTFNERLLDYEALKEMRFLKACLCESMRLYPPVAWDSKHAVVNDTLPDGTAVRTGDRVTYFPYGMGRMEGLWGKDRLEFKPDRWFVEPGNERGELKKVCPYKFPVFQAGPRVCLGKEMAFIQMTYMVASILSRFELRPVDLGRPIFVPLLTAHMAGGLKVLVRPRSRE* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00308 497 FunFam Cytochrome P450 23 497 - -
Eupl04g00308 497 Pfam Cytochrome P450 31 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00308 497 PANTHER CYTOCHROME P450 22 489 - -
Eupl04g00308 497 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00308 497 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00308 497 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00308 497 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00308 497 SUPERFAMILY Cytochrome P450 21 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00308 497 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00308 497 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00308 497 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00308 497 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00308 497 Gene3D Cytochrome P450 22 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00308 497 CDD CYP86A 65 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00308 Eupl-Chr4 4852080 4853635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00308 8 495 Cytochrome P450 AT3G48520 61.179 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00308 K20665 - nnu:104592904 706.442