Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00305 ATGGCGGCAACAATTGATGGAGATGAGAGGGTTATGGCAGCAGCTCAGCAGATTGTGAAGAATTTAGGAACTTCACAGAACGTTACTGAGGACATGATCTTGATCCTCTCGAGTTTCGATAATCGCCTCTCTACGATCACTAAATTGCTCCCTAAGGGCGGTGGAGGCTCTGGTAAAAGCAAGAACGCAGAGCGATTCGAAACGGCGGAGAAGATCATTCTTCGGTGGGACTCGAATTCGGATACTCCGCAATACCACTCGTTGCCGTGGGAGGATTCCCCTGATGAAGCCGCGGAGTACCTCGCAGCCGTTGACGAGATCATCTGTTTGACGGAGGAGCTGATGCCATCTTCTGATGGAGAAATCATGGACCGTGCCGAGAGCGTTCTACAGCAGGCGATGTCGAGGCTGGAGGATGAGTTCCGCCACATCCTGATCCAGAACACGGTCCCTCTCGACGCCGTGGCACTTTATGGATCGATTCGTAGGGTTTCACTTTCTTTTGCTTCGAATGATGGTGAGGCCGAGGACTTTGAGACCTCTCTTGATGATGAGCAAGAGAGTTGCTGTGAGGAGAGAGGAGGAAGTTTGGGGGAGGGTCTGAGCGTGGATTTGATCAATCCGGATGCTGTTGCGGATCTCAAAGAGATTGCAGATAGAATGATCAGGTCGGGGTACGAGAAGGAGTGCTGTCAAGCTTACAGTAGTGTTCGTCGCGATGTTCTGGACGAGTGTTTATCGATTCTTGGTGTCGAGAAACTAAGCATTGAGGAAGTACAGAAGATCGAGTGGAGGTCACTGGATGAGAAGATGAAGAAGTGGATTCAAGCAGTTAAGATTGTAGTTAGGGTTCTTTTGTCCGGTGAGAAGCAACTCTGCGATCAAATTTTTGTTGAATCGGAACTCATCAGGGAGGTCTGCTTTACTGAGGCTGCAAAGGGCTGCGTGACACAGTTGTTGAATTTCAGTGAGGCCATTTCGATTGGACGCCGGACATCAGAGAAGCTGTTCCGGATTCTTGACATGTACGATGCATTTGCTGATGTGCTGCCCGATTTGCAAACGTTGTTTTCAGATGACGATTTTGTGTGCAGAGAGGCGCGAGGTATACTGGCTGGGCTCGGGGAGGCTGCAAAGGGCACATTTGCTGAGTTTGAGAATGCAGTTCAGAGTGAGACATCCCGGAGGCCGATCCAGGGTGGCGAGATCCACCCGTTGACACGCTATGTGATGAATTATGTCAAGTTGCTTGTTGATTATAGTGATACGCTGAATTTTCTTTTTGAAAGCAGTACAGATGACTCAGATAGTCTGGATGGTAATGATGATACTTCGCATTTAGGCAGCATATCCCCGATAGGTTGCCGTTTGTTGTCGTTAATTTCGTCCCTGGAATCAAACCTCGAGGAGAAGTCAAAACTCTATGAGGATGGTGCAATGCAATATATATTCCTGATGAATAATATCCTCTACATAGTTCAGAAAGTGAAGGACTCCGAGCTTGGGAAGCTTTTGGGAGATCACTGGATCCGCAAACGCCGTGGCCAGGTACGCCAGTACGCCACGAGTTATCTAAGAGCTTCTTGGAGCAAAGTCTTGTCTTGCCTCAAGGATGAAGGAGTTGGGGGTGGTGGGAGCTCAAGTAATGTGTCCAAGGTGGCTCTAAAGGAAAGGTTTAAGAATTTTAACTCGGGATTTGAAGAAGTTTATAGGAACCAAACAGCTTGGAAAGTTCCAGATCCTCAACTTCGGGAAGAGCTTCGGATATCTATATCAGAGAAAGTCATTCCAGCATACCGCTCTTTTTTGGGGAGGTTTGGGAACCATTTAGAGAGTGGACGACATGCAGGGAAATACATAAAGTACACATCAGAGGATTTAGAAAACCATATATTGGATTTATTCGAAGGATCACCTGGAGTTCTGCACAATCCAAGGAGAAAATAA 1947 0.4751 MAATIDGDERVMAAAQQIVKNLGTSQNVTEDMILILSSFDNRLSTITKLLPKGGGGSGKSKNAERFETAEKIILRWDSNSDTPQYHSLPWEDSPDEAAEYLAAVDEIICLTEELMPSSDGEIMDRAESVLQQAMSRLEDEFRHILIQNTVPLDAVALYGSIRRVSLSFASNDGEAEDFETSLDDEQESCCEERGGSLGEGLSVDLINPDAVADLKEIADRMIRSGYEKECCQAYSSVRRDVLDECLSILGVEKLSIEEVQKIEWRSLDEKMKKWIQAVKIVVRVLLSGEKQLCDQIFVESELIREVCFTEAAKGCVTQLLNFSEAISIGRRTSEKLFRILDMYDAFADVLPDLQTLFSDDDFVCREARGILAGLGEAAKGTFAEFENAVQSETSRRPIQGGEIHPLTRYVMNYVKLLVDYSDTLNFLFESSTDDSDSLDGNDDTSHLGSISPIGCRLLSLISSLESNLEEKSKLYEDGAMQYIFLMNNILYIVQKVKDSELGKLLGDHWIRKRRGQVRQYATSYLRASWSKVLSCLKDEGVGGGGSSSNVSKVALKERFKNFNSGFEEVYRNQTAWKVPDPQLREELRISISEKVIPAYRSFLGRFGNHLESGRHAGKYIKYTSEDLENHILDLFEGSPGVLHNPRRK* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00305 648 FunFam Exocyst subunit Exo70 family protein 84 643 - -
Eupl04g00305 648 Pfam Exo70 exocyst complex subunit 272 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
Eupl04g00305 648 Gene3D Exocyst complex component Exo70 76 641 - -
Eupl04g00305 648 SUPERFAMILY Cullin repeat-like 63 636 IPR016159 -
Eupl04g00305 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 59 637 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00305 Eupl-Chr4 4821802 4824272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00305 9 648 EXO70 exocyst subunit family AT5G50380 61.919 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00305 K07195 - nnu:104591704 1020.76