Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00296 ATGAATTCTTACTTACTAGCCAACATTTTCCTCTTGTTGCTCTGCTTTGTGGCCATTAACCAAATTCCATGGCCTCTCTTCTTCTTTTTCTTCTCTTTCTTTCATTTTGTACTCAACTTTTGGCTAGTACCAGGAGGTTTTGCATGGCGAAACGCCATTAAAAACTATCCGAAAATCCATGGACCAATTGGATGGCCCTTATTGGGTAGTATCTCTGTAATGGGTTCACTTGCTCATCGTAAATTGGCTGTGATATCAGCCTCACTCGATGCAACGCGTCTCATGGCATTTAGTCTAGGTACAACGCGTGTGATCATCAGTAGTCATCCTGATACAGCGAAGGAGATCCTATGTGGGTCCGCTTTCTCTGATCGTCCAATGAAGGAATCAGCACGACTACTGATGTTCGAGCGTGCCATTGGGTTCGCTCCTTCTGGTGTTTACTGGCGACATCTCCGACGTATCGCTGCAAATTATATGTTCTCTCCTAGGAGAATTGCTAGTCTTGAGGGGGTTCGACAACGTGTCGCGGATGAGATGGTGGTCGGATTATTTAAAGAGATGGAGGAGAGAGGGGTTGTGGAGTTGAGGGGGATGGTTCAGAAGGGTTCTTTGAGTAATGTTATGGAGAGTGTTTTTGGGAGGTGTTTGTCTTTAGAAGGGGAGGAGTTTGGATTTATGATTAAAGAAGGGTATGATTTAATTGGAAGATTTAATTGGGAGGATTATTTTCATTTGGGTTTTTTGGATTTTTATGGGGTTAGGAGAAGGTGTCATAAGTTGGCTGTTAGGGTTAACGGTCTAGTGGGTCAGATTATAAATGAGAGGAGAAAAGAGGGGGATTTCAAGGCAAGGAATGACTTCCTTAGTCTTTTGCTCTCTTTGCCTGAAGAAGACCGGTTAAGCGATTCTGACATGGTGGCAGTTCTATGGGAGATGATATTTCGGGGAACAGACACAGTTGCCATCCTTCTGGAATGGATCATGGCTAGAATGATCTTACACCCAGAAATCCAAGCGAAAGCCCAAGAAGAACTTGACACATATATCGGCAATCATAGACACGTGCGGGACTCAGACATCCCAAATCTCCTTTACCTTCATGCGATAGTGAAGGAAGTACTCCGGATGCACCCTCCTGGCCCATTACTGTCATGGGCCCGACTCGCCATTCACGATGTCCATGTAGGTAAGTTCTTTGTACCAGCTGGCACAACAGCTATGGTAAACATGTGGGCCATTACCCATGACGAGTCTATCTGGAAAGACCCATGGACTTTCAGACCAGAACGGTTCATGGAAGAGGAGGTGAGTGTCATGGGCTCAGACCTACGGCTTGCACCATTTGGTTCGGGTCGTAGGGTGTGCCCAGGTAAAGCGCTAGGGTTGACCACTGTTCACTTGTGGCTCGCACGCCTTCTCCACCAATTCACCTGGCTTCCAGCGCAGGCGCAACCCGTCGATCTTTCAGAGTGCCTACGCCTCTCACTTGAAATGAAGAAACCTTTGGCATGTCGCATGGTTCGCCGGTTTTCGACAGTGATCGTATGA 1551 0.4668 MNSYLLANIFLLLLCFVAINQIPWPLFFFFFSFFHFVLNFWLVPGGFAWRNAIKNYPKIHGPIGWPLLGSISVMGSLAHRKLAVISASLDATRLMAFSLGTTRVIISSHPDTAKEILCGSAFSDRPMKESARLLMFERAIGFAPSGVYWRHLRRIAANYMFSPRRIASLEGVRQRVADEMVVGLFKEMEERGVVELRGMVQKGSLSNVMESVFGRCLSLEGEEFGFMIKEGYDLIGRFNWEDYFHLGFLDFYGVRRRCHKLAVRVNGLVGQIINERRKEGDFKARNDFLSLLLSLPEEDRLSDSDMVAVLWEMIFRGTDTVAILLEWIMARMILHPEIQAKAQEELDTYIGNHRHVRDSDIPNLLYLHAIVKEVLRMHPPGPLLSWARLAIHDVHVGKFFVPAGTTAMVNMWAITHDESIWKDPWTFRPERFMEEEVSVMGSDLRLAPFGSGRRVCPGKALGLTTVHLWLARLLHQFTWLPAQAQPVDLSECLRLSLEMKKPLACRMVRRFSTVIV* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00296 516 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 SUPERFAMILY Cytochrome P450 61 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 Gene3D Cytochrome P450 48 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 PANTHER CYTOCHROME P450 78A7-RELATED 20 510 - -
Eupl04g00296 516 Pfam Cytochrome P450 60 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g00296 516 FunFam Cytochrome P450 78A5 51 510 - -
Eupl04g00296 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00296 Eupl-Chr4 4717547 4720790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00296 23 510 Cytochrome P450 AT1G74110 52.299 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00296 - - qlo:115979147 785.023