Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00289 ATGGCGTCTGTTTGTGCTTCTTCTGCCATTGCAGCAGTTGCCATCTCCTCTTCCAGTTCTAAGAAGAGTGGATCTGGTTTGGAAGCAATAAAGGCTTCTTTCCTTGTTGGGAGAAAACTGAGACAAAGGAAGCTTACAGCACAAGCAGTAGCACGATCTCCCTGTGTGTGTGCAGTAGCAGATGCCGATCGGCCGCTCTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTTGATGGCAGCCTTCCAGGAGACTTTGGATTCGACCCTCTTGGTCTCGGATCTGATCCAGAGAGCCTAAGATGGAACCAGCAAGCAGAGCTTGTGCACTGCAGATGGGCAATGCTTGGTGCTGCCGGTATTTTCATCCCTGAATTCCTAACTAAGATTGGGATCCTTAACACCCCATCATGGTACACTGCCGGAGAACAAGAATACTTCACAGACACAACCACCCTCTTCATAGTTGAGCTCATCTTCATAGGATGGGCTGAGGGCAGACGATGGGCTGACATCCTCAAGCCTGGGTCCGTGAACACTGACCCCATCTTCCCCAACAACAAACTCACGGGGACAGATGTTGGATACCCTGGTGGCCTCTGGTTTGACCCTTTTGGCTGGGGAACTGGTTCTCCTGAGAAGCTTAAGGAGTTGAGGACAAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCCGTGATGGGTGCATGGTTTCAAGCCATCTACACTGGCACAGGCCCTATCGACAACCTCTTTGCCCACCTTGCTGACCCTGGACATGCCACCATTTTTGCTTGTACAAATGCCTCCACCCATGTTTCCTTAGGTCTGAGGCCTTAA 837 0.5173 MASVCASSAIAAVAISSSSSKKSGSGLEAIKASFLVGRKLRQRKLTAQAVARSPCVCAVADADRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPFGWGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNLFAHLADPGHATIFACTNASTHVSLGLRP* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00289 278 FunFam Chlorophyll a-b binding protein, chloroplastic 74 259 - -
Eupl04g00289 278 Pfam Chlorophyll A-B binding protein 73 239 IPR022796 -
Eupl04g00289 278 Gene3D Chlorophyll a/b binding protein domain 74 259 - -
Eupl04g00289 278 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 17 266 IPR001344 GO:0009765|GO:0016020
Eupl04g00289 278 SUPERFAMILY Chlorophyll a-b binding protein 60 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00289 Eupl-Chr4 4619290 4621567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00289 46 265 Chloroplast and Mitochondria Gene Families AT3G61470 86.486 3.56e-143 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00289 K08908 - mof:131144754 470.314