Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00270 ATGGAGTGCAATAAAGATGAGGCCACCAGGGCAAAAGAAATTGCTGAGAGGAAGTTTACAGCGAGGGACGTTGCTGGTGCGAAGAAATTTGCTTTGAAAGCCCATAATTTGTATCCCGGACTTGAGGGTCTTTCCCATATGCTGGCAACTTTTGATGTGTATCTGTCGTCCGAGAACAAAGTAAGTGGAGAAGCAGATTGGTATGGGATCCTCGGTGTGAATCCCTTGGCTGATGACGAGACAGTAAAGAAACAGTACAGGAAGCTGGCTCTCATGCTTCACCCTGACAAGAACAAGTCAGTAGGGGCAGATGGAGCATTTAAGCTCATTTCGGAGGCATGGAGTGTGTTGTCCGATAAGACTAAAAGACTAGCTTATGATCAGAAGAGGTTTTTAAAAACATCCCAACAAAAAGTTCCACCGGCAAGTGGGGGTCCATCGGCCCCACCTGGCGCAAATGGTTTTCATAATGCCAACAACAATACGACTTCAAACGTGAGGACTCAAAAGAGTGCTACTCGGACCCACCCAACTGCCCCTTCTTCCCGTCATTCAAAACCCACTACATTTTGGACTGCATGCCATAGGTGCAAGATGCAGTATGAGTATCTCCGGGTCTATCTCAATCACAATCTCCTTTGCCCCAATTGCCATGAACCCTTTTTGGCCGTAGAAACAGCAGCCCCACCGTCAAATGGTCCTAATTCATCCACCCCTTGGTCTTTCTCCCAGCAGCGTCAGAATTCGAACCATCATACGGCAAACAAGAATGCTTATGCTCCAGGAAGGAACACAGCTGCCGCTCCAAATGTGGGACCAGCAGGGTACACAGGTATTGATTCATTTAATCACATGAACTTCCAGTGGGCTCCATTTTCTAGAACAGCTGGTGTTGGGGGTACTGGTTCGCCATCTGTTGCTGCTCAAGCTGCAAATGTGGTTCAACAAGCCTATGATAAAGTGAAGAGAGAGCGCGAGGAAGCCCAGGCAGCGGCCAGAAGACAGGAAGCCCTTCGGAGGAAGCACAATGTTTCTAGGAGGATGGCTAGCAATTCATCTGCCGGTTCTAGCCAAGATCTCAAAGGAGAAAGGCCTGTTAAAAAAAGAAGAAGCGCCGATGACGATGGTAGGAATCATTATGGAGGAAATACGGCGAATCAAATGGCCACAGGGAGTGGAGGAACAGGCATGGGTAGCGCATCAGGCTTTAAACAGGGTGGTTTTGAAATGGAAAGGGCTAATGGTTTTTCTGTTACTAATAAGCCTAACAGTACAAGGGAGTTGTCACAGCTTGAAATTCGAAATATGTTGATGGAGAGGGCTAGGAGAGAAATCCGCAAGAAGTTAAATGAATGGAGTTTGGCTAGAGAAGCCAAGGCTGCAGAGAAAGAAAAAGGGAAAGAGGAGGGGAATGTGAAAGAAAAAGAAACAGCTGCAGTAAATGGCGACACAAGTGATCAGAACAAGTCGGTCAAGTCCGTTGATGCCAAGGATGGAGTGCCGGATAAGACGGTCTCCCATGACGTCTCTCATGTTGATTCAGATGCCGAAGTCCGTGAATTCATTACGATAAGTGTCCCTGATCCGGACTTTCATGATTTTGACAAGGATCGGTCTGAAAAAGCTTTCGGAGATAACCAGGTGTGGGCTGCATATGATGATGATGATGGGATGCCTCGTTATTATGCCTTGATTAATAGTGTGATATCTTTGAATCCATTCAAGATGCGGATCAGCTGGCTTAACTCCAAAACCAGCAGCGAATTGGGCCCACTAAACTGGATCGGTTCTGGTTTTTCCAAAACTTGTGGGGATTTCAGGGTGGGGAGATACGAAGTCAATGACTCGCTCAATTCTTTCTCTCATAGGGTTAGGTGGACAAAAGGCACACGTGGGGCTGTTCGAATATTTCCCAGGAATGGAGATGTGTGGGCCCTCTATCGGAACTGGTCCCCAGATTGGAATGAACTTACCCCTGATGAAGTGATACACAAGTATGACATGGTGGAGGTGCTTGATGATTATAATGAGGAGCAAGGCGTTTCTGTTACTCCTCTAGTTAAGGTTGCTGGTTTCAAGACAGTGTTCCATCGGCACTTGGACCCCGGGGAAGTAAAGATAATCCCTAGAGAAGAGATGTTTCGGTTCTCGCATCAGGTCCCTTCTTACTTGCTTACGGGCCAAGAAGCTCAAAATGCTCCAAAGGGTTGCCGGGAGCTGGACCCAGCAGCTACTCCTTTGGAACTTCTTCAGGTAATAACAGAAGCTAAGGAAGAAGAGATGGTGGAGAATGCTGAAGAACAGATAATAACAGAAGCTATGGAAGAAGACATTGTGGAGAATGCTGAAAAACAGATAACAACAGAAGCTATGGAAGTAGACATTGTGGAGAATGCTGAAAAACAGATAATGACAGAATCCAAGGAACAAGGGATTGGGGAGAAGGCTGGAAAACGGGTCATAACAGGAGCTATGGAAGAAGAGACGGTAGAAAATGCTGAAGAACAGAATGCCAAAGAACAGCTAGTTAGTTGA 2535 0.4655 MECNKDEATRAKEIAERKFTARDVAGAKKFALKAHNLYPGLEGLSHMLATFDVYLSSENKVSGEADWYGILGVNPLADDETVKKQYRKLALMLHPDKNKSVGADGAFKLISEAWSVLSDKTKRLAYDQKRFLKTSQQKVPPASGGPSAPPGANGFHNANNNTTSNVRTQKSATRTHPTAPSSRHSKPTTFWTACHRCKMQYEYLRVYLNHNLLCPNCHEPFLAVETAAPPSNGPNSSTPWSFSQQRQNSNHHTANKNAYAPGRNTAAAPNVGPAGYTGIDSFNHMNFQWAPFSRTAGVGGTGSPSVAAQAANVVQQAYDKVKREREEAQAAARRQEALRRKHNVSRRMASNSSAGSSQDLKGERPVKKRRSADDDGRNHYGGNTANQMATGSGGTGMGSASGFKQGGFEMERANGFSVTNKPNSTRELSQLEIRNMLMERARREIRKKLNEWSLAREAKAAEKEKGKEEGNVKEKETAAVNGDTSDQNKSVKSVDAKDGVPDKTVSHDVSHVDSDAEVREFITISVPDPDFHDFDKDRSEKAFGDNQVWAAYDDDDGMPRYYALINSVISLNPFKMRISWLNSKTSSELGPLNWIGSGFSKTCGDFRVGRYEVNDSLNSFSHRVRWTKGTRGAVRIFPRNGDVWALYRNWSPDWNELTPDEVIHKYDMVEVLDDYNEEQGVSVTPLVKVAGFKTVFHRHLDPGEVKIIPREEMFRFSHQVPSYLLTGQEAQNAPKGCRELDPAATPLELLQVITEAKEEEMVENAEEQIITEAMEEDIVENAEKQITTEAMEVDIVENAEKQIMTESKEQGIGEKAGKRVITGAMEEETVENAEEQNAKEQLVS* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00270 844 PANTHER BNAC03G44070D PROTEIN 1 746 - -
Eupl04g00270 844 SMART dnaj_3 65 122 IPR001623 -
Eupl04g00270 844 MobiDBLite consensus disorder prediction 134 187 - -
Eupl04g00270 844 Coils Coil 458 478 - -
Eupl04g00270 844 MobiDBLite consensus disorder prediction 229 260 - -
Eupl04g00270 844 MobiDBLite consensus disorder prediction 325 406 - -
Eupl04g00270 844 MobiDBLite consensus disorder prediction 380 399 - -
Eupl04g00270 844 MobiDBLite consensus disorder prediction 228 266 - -
Eupl04g00270 844 Coils Coil 307 341 - -
Eupl04g00270 844 Pfam DnaJ domain 66 127 IPR001623 -
Eupl04g00270 844 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Eupl04g00270 844 MobiDBLite consensus disorder prediction 153 187 - -
Eupl04g00270 844 MobiDBLite consensus disorder prediction 361 377 - -
Eupl04g00270 844 Pfam Domain of unknown function (DUF3444) 523 729 IPR024593 -
Eupl04g00270 844 MobiDBLite consensus disorder prediction 461 507 - -
Eupl04g00270 844 Coils Coil 779 799 - -
Eupl04g00270 844 Gene3D DnaJ domain 63 177 IPR036869 -
Eupl04g00270 844 MobiDBLite consensus disorder prediction 461 480 - -
Eupl04g00270 844 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Eupl04g00270 844 MobiDBLite consensus disorder prediction 490 507 - -
Eupl04g00270 844 CDD DnaJ 66 119 IPR001623 -
Eupl04g00270 844 Coils Coil 428 448 - -
Eupl04g00270 844 PRINTS DnaJ domain signature 86 101 IPR001623 -
Eupl04g00270 844 PRINTS DnaJ domain signature 68 86 IPR001623 -
Eupl04g00270 844 PRINTS DnaJ domain signature 102 122 IPR001623 -
Eupl04g00270 844 SUPERFAMILY Chaperone J-domain 57 126 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00270 Eupl-Chr4 4427698 4432623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00270 4 234 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.177 3.65e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00270 - - nnu:104591743 1146.72