Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00266 ATGAATGATCTCCACGTATTTGGATTTGATTTGAAGGTGTTGGGACATCTGCTTTTGATGCTATGCGGTTGGATTCTCTCTGAGATTCCCATGAACTGGTTCATTAATGGTGGAGTCATGGAGAAGACTGCCTTTCTTGGCGGTGATAGGGGGAAGAGATGGCCAAAATGGTTGGAGAGTATCTCGGGAAGTGGTTGGAAGAACCAGCACCATTACTACGAGTATATTGGGTCGAAGAAGGTTCGAAAAACGTTGTGGGGGAAGCTTTTGGTGTCATGGGTAGTTGGTTGGATCATGGTGTCATTGTGGATCTTCTGGTATATGAACTCTCATGCGACTGAGAAGAGGAAAGAGACCCTTGGGAGCATGTGCGACGAGCGGGCGAGGATGTTACAGGACCAGTTTAATGTGAGTATGAACCACATTCAGGCCTTGTCCATCCTGATATCAACCTTCCACCATGGCAAGAACCCCTCTGCTATTGATCAGACAACTTTCTCAAGGTACACAGAAAGAACCGCATTCGAGAGGCCGCTCACAAGTGGTGTGGCTTATGCTGTTAGGGTACTCCACTTCGAAAGGGAACAATTTGAAAAGCAACAAGGGTGGACTATCAAGAGGATGGATACAGTGGAACAAACCCCGGTTCGGGAGGATGACTATGCCTCTGAGACCCTGGAGCCAGCCCCTTTTCAAGATGAATATGCCCCCGTTATCTTTGCACAGGATACCATTTCACACGTCGTTTCTCTTGATATGCTGTCCGGAAAGGAAGATCGTGACAATATCTTACGTGCAAGAGCATCTGGAAAGGGGGTTCTTACTGCTCCTTTCAGACTAATCAAGTCAAAGCGCCTTGGGGTTATACTAACGTTTGCTGTTTACAAGTCAGAACTCTCATCCAATGCAACCCCGAATGAGCGGATCCAAGCAACCGATGGGTATCTCGGTGGAGTCTTTGATATAGAATCACTTGTGGAGAAGTTACTTCACCAGCTTGCAAGCAAACAAACCATCCTTGTGAATGTGTATGACACCACTAACTTCTCACATCCAGTTAGCATGTACGGTTCGAACGTCACAGATGATGAGATGTACCACATTAGCAACCTTAACTTTGGGGATCCATTTAGGAAGCATGAGATGCGTTGCAGATTCAAGCAGAAGCCACCGTTGCCATGGCTGGCGATAACAACATCAATCGGTATCCTCGTGATTGCATTGCTTGTTGGACATATATTCCATGCAACAGTAAATAGGATCGCAAAAGTAGAGGATGATTACCATAAGATGATGGAGCTAAAAAAGCGGGCTGAGGCAGCAGATGTTGCAAAATCCCAGTTCCTTGCTACTGTTTCCCATGAGATCAGAACCCCGATGAATGGTGTTCTAGGGATGTTGCAGATGCTTATGGACACGGACCTAGATACAACGCAGCAAGATTATGTGAGAACTGCCCAGGCTAGTGGAAAGACTCTTGTTTCACTTATAAATGAGGTTTTGGATCAAGCCAAGATTGAATCTGGTAAACTCGAGCTCGAGGCTGTCCAGTTTGATCTGCGGGCGATCTTGGATGATGTTTTATCGCTTTTTTCTGGGAAGTATCAAGACAAAGGAATAGAGTTAGCAGCGTACATCTCAGATCGGGTTCCTGAAATTCTAATCGGTGATCCCGGGAGATTTCAGCAAATCATCACGAATCTCATGGGGAATTCAATCAAATTCACAGAGAAGGGACACATCCTTGTGACTGTCCATCACGTTGAGGAGGTGATGAGTTCAATAGAAGTCGAGACAGAAGCATCAGCAAAGAACACCTTGAGTGGCTTTCCTGTGGCAGATAGGCGCCGTAGCTGGGAAGGTTTCAAGAATTTCAGTCAAGAGGGACCCATGTGTCCACAGACTTTCTCATCCACCTCCTCTGAGCTCATAAATCTAATTGTATCAGTTGAGGATACAGGCGTGGGGATCCCTTTGGAAGCCCAATCTCGTGTTTTCACTCCATTTATGCAGGTGGGCCCATCCATTTCTCGTATCCATGGGGGCACGGGTATTGGACTGAGTATAAGCAAGTGCCTGGTTGGTCTTATGAAGGGGGAGATTGGGTTCGTCAGTGAACCCCAGATTGGGTCCACCTTCACCTTCACTGCCGTTTTCACCAATGATCGCTCCAATTTAAACGAGTATAAGAATCAGCAAATTAATAAACAGCCATCTGAATTTCAAGGAATGACAGCATTGGTTGTGGACCCCAGACCTGTCCGGGCCAAGGTAACAAGATATCATCTCCAGCGGCTGGGAATCTATGTTGAAGTAGCCTCTGATCTAAACCAAGGTTTCTCTGGCATTACCAGCGGGACAACAGTCATCAACATGGTCCTTGTCGAAAAAGAAGTTTGGGAAAAGGACCCCGATAGATCAGCTCTCTTTGTTAACAAGTTAAGGAAGTATGAACGTTCGTATCCACTGAAACTATTTCTTCTAGCTAATTCCTTCGGCCCTATCAAAACCAATGCTGCAATATTTGGTGGCTATACCCCAACAGTCATCATGAAGCCCCTGAGAGCAAGTATGCTGGTCGCATCTCTACAACGAGCCATGGGTGTTGGGAATAAGGGGAATTGTCGCAATGGAGGGCTCCCCCTCCAGTCCCTCAAGCATCTTCTTCGTGGGAAACAGATTCTGGTTGTAGACGACAATAATGTGAACCTCAGAGTAGCTGCTGGTGCTTTGAAGAAGTATGGAGCTGAAGTGGAATGCGCGGACAGTGGGAAAAAGGCAATCACAATGCTTAAACCACCCCACCACTTTGATGCCTGCTTCATGGATATCCAGATGCCAGAAATGGATGGGTATGCATATATAAATATATATTTTTTGATAAGTAAAATTTCATTAAAAAGAGGGGAAACACCAAAAGAAGCCAAGAGACCTCTCAAGGACAGGAAAACAAAGAATCAAAAAGCAAACACGCAGCTTATCCCGGCTCTGAACAATCCCTTCCCCATTATAAAAGAAATCAACAGATCTGATCCCCCGAGTCCTTTCAAGAATGACACCCAGCTGAACACAGACACCTTAGTTCTAAGCCACCACCACCTCAAAGGGGTTCGAAGCTACAAGAAAAATTCGGGATATGGAACACGACATCAATAA 3156 0.4579 MNDLHVFGFDLKVLGHLLLMLCGWILSEIPMNWFINGGVMEKTAFLGGDRGKRWPKWLESISGSGWKNQHHYYEYIGSKKVRKTLWGKLLVSWVVGWIMVSLWIFWYMNSHATEKRKETLGSMCDERARMLQDQFNVSMNHIQALSILISTFHHGKNPSAIDQTTFSRYTERTAFERPLTSGVAYAVRVLHFEREQFEKQQGWTIKRMDTVEQTPVREDDYASETLEPAPFQDEYAPVIFAQDTISHVVSLDMLSGKEDRDNILRARASGKGVLTAPFRLIKSKRLGVILTFAVYKSELSSNATPNERIQATDGYLGGVFDIESLVEKLLHQLASKQTILVNVYDTTNFSHPVSMYGSNVTDDEMYHISNLNFGDPFRKHEMRCRFKQKPPLPWLAITTSIGILVIALLVGHIFHATVNRIAKVEDDYHKMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTDLDTTQQDYVRTAQASGKTLVSLINEVLDQAKIESGKLELEAVQFDLRAILDDVLSLFSGKYQDKGIELAAYISDRVPEILIGDPGRFQQIITNLMGNSIKFTEKGHILVTVHHVEEVMSSIEVETEASAKNTLSGFPVADRRRSWEGFKNFSQEGPMCPQTFSSTSSELINLIVSVEDTGVGIPLEAQSRVFTPFMQVGPSISRIHGGTGIGLSISKCLVGLMKGEIGFVSEPQIGSTFTFTAVFTNDRSNLNEYKNQQINKQPSEFQGMTALVVDPRPVRAKVTRYHLQRLGIYVEVASDLNQGFSGITSGTTVINMVLVEKEVWEKDPDRSALFVNKLRKYERSYPLKLFLLANSFGPIKTNAAIFGGYTPTVIMKPLRASMLVASLQRAMGVGNKGNCRNGGLPLQSLKHLLRGKQILVVDDNNVNLRVAAGALKKYGAEVECADSGKKAITMLKPPHHFDACFMDIQMPEMDGYAYINIYFLISKISLKRGETPKEAKRPLKDRKTKNQKANTQLIPALNNPFPIIKEINRSDPPSPFKNDTQLNTDTLVLSHHHLKGVRSYKKNSGYGTRHQ* 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00266 1051 Pfam His Kinase A (phospho-acceptor) domain 444 509 IPR003661 GO:0000155|GO:0007165
Eupl04g00266 1051 MobiDBLite consensus disorder prediction 970 989 - -
Eupl04g00266 1051 ProSiteProfiles Response regulatory domain profile. 893 1051 IPR001789 GO:0000160
Eupl04g00266 1051 CDD HisKA 444 505 IPR003661 GO:0000155|GO:0007165
Eupl04g00266 1051 FunFam Histidine kinase 4 161 390 - -
Eupl04g00266 1051 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 431 510 IPR036097 GO:0000155|GO:0007165
Eupl04g00266 1051 Gene3D - 108 160 - -
Eupl04g00266 1051 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 556 719 IPR003594 -
Eupl04g00266 1051 Gene3D - 882 963 - -
Eupl04g00266 1051 ProSiteProfiles Response regulatory domain profile. 745 867 IPR001789 GO:0000160
Eupl04g00266 1051 CDD HATPase_EvgS-ArcB-TorS-like 561 719 - -
Eupl04g00266 1051 SUPERFAMILY CheY-like 890 956 IPR011006 -
Eupl04g00266 1051 Coils Coil 421 441 - -
Eupl04g00266 1051 ProSiteProfiles CHASE domain profile. 157 383 IPR006189 -
Eupl04g00266 1051 Gene3D - 412 507 - -
Eupl04g00266 1051 PRINTS Bacterial sensor protein C-terminal signature 681 699 IPR004358 GO:0016310|GO:0016772
Eupl04g00266 1051 PRINTS Bacterial sensor protein C-terminal signature 664 674 IPR004358 GO:0016310|GO:0016772
Eupl04g00266 1051 PRINTS Bacterial sensor protein C-terminal signature 646 660 IPR004358 GO:0016310|GO:0016772
Eupl04g00266 1051 PRINTS Bacterial sensor protein C-terminal signature 705 718 IPR004358 GO:0016310|GO:0016772
Eupl04g00266 1051 SMART HKATPase_4 556 721 IPR003594 -
Eupl04g00266 1051 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 498 716 IPR036890 -
Eupl04g00266 1051 CDD REC_hyHK_CKI1_RcsC-like 894 952 - -
Eupl04g00266 1051 PANTHER TWO-COMPONENT HISTIDINE KINASE 119 952 - -
Eupl04g00266 1051 MobiDBLite consensus disorder prediction 970 987 - -
Eupl04g00266 1051 Gene3D CHASE domain 161 390 IPR042240 -
Eupl04g00266 1051 SUPERFAMILY CheY-like 740 868 IPR011006 -
Eupl04g00266 1051 SMART CHASE_2 157 358 IPR006189 -
Eupl04g00266 1051 FunFam Histidine kinase 4 416 507 - -
Eupl04g00266 1051 Gene3D - 508 724 IPR036890 -
Eupl04g00266 1051 Pfam CHASE domain 160 356 IPR006189 -
Eupl04g00266 1051 SMART HisKA_10 444 509 IPR003661 GO:0000155|GO:0007165
Eupl04g00266 1051 ProSiteProfiles Histidine kinase domain profile. 451 721 IPR005467 -
Eupl04g00266 1051 Pfam Response regulator receiver domain 894 955 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00266 Eupl-Chr4 4375777 4384640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00266 1 952 Miscellaneous Gene Families AT1G27320 67.459 0.0 1279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl04g00266 CHASE 1.3e-36 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00266 K14489 - nnu:104591747 1510.35