Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00261 ATGGAATCCCCCGGATTTGATACAAATGAGCTAGTTCAAGAAGCTCAAAATCGTTGGCTGAAGCCTGCAGAAGTGCTCTTTATTTTACAGAATCATCAGAATCACCAGCTCACTGAGGCACCTCCTCAAAAGCCATCTAGTGGGTCTTTGTTCCTTTTCAACAAGAGGGTCCTCCGATTTTTCCGTAAAGATGGTCATATTTGGCGAAAAAAGAGGGATGGGAGAACAGTTGGGGAAGCACATGAACGGCTCAAGGTTGGAAATGTTGAAGCTTTGAATTGTTATTATGCCCATGGAGAGCAGAATCCCAATTTTCAAAGGCGAAGCTATTGGATGCTGGATCCGGCGTGTGAGCACATTGTTCTTGTTCACTATAGAGAAATCAAAGAGGGACGGCACAGTGCTGGATCGACCTCACACTTGTCACCAGGCTCCTCTTCTACTGTAAGTCAGAGTCCCAGTTTTTATGCCGCCCCAAATCCAGGATCCACTTCTGCAGTTAGTGAATTATATGAACCATATCGGAGTTCATTTAGTCCAGGGTCCGTGGAAGTCAGTTCTGAGTTAGTTATCGGGAATAATGGGATGGATCACTTGGATAGGACAGGTAGATCAGGAGAGTTTAGTAGTTCGCCTGAAGCTGAGGTTAGTCAAGCACTGCGAAGGCTTGAGGAGCAGTTAAGTTTGAATGACGATGACATAGCAGAACTTTCTCCATACTGTGGCCAGAATGATAAATTGAAAGACTCAGGAGTTCTAGATTATGAAAGGAGGTCCAACCAGGATGAGTTTGCAGCTCTACAACGTGGATCAGCATACAGAGAGAATGATCAACATTTTAGTGCAAATGCGGGGATATTAGATGATTTAGACAGCAGGCTGTTTTCACAAAATTCAGGTGATAACAGGAAGCAACATCATATACAGTTTGGTCCTGAATATACATACGAAAGGAAAGAGTCTCCATTTTGGAAAGAGATGCTGGAGCCACGCTCAGGTTCAACTTGGATTGGTTCCGGAGACAAAAATTTCAATACATTGGATGAAAGTGAGAAGACACCATCTTCATTAGAAACGGGGAAAATCTCTGCAAACCTAGCTGAACAACAGAAGAACTGTACTTCTCAGGGGCTAGATCTTAGCGGAAATAATGCAGAAAATAAGAGTAACTATTATCCAATTTCTGAGAATAATTTCAGCCTGCAGCTTTCAGCAGCTAGGCGATTTCTATTAGGCTCTGACAACCCTATTGTATCACCAACTTCAACGTCAATGCTTCAAGAAATTGAAAACTCTAAAATTTCTGCATACTCTTCTGGAATTAGTACTCATGAAGCCAACCTTGACTACTACTCAATGTGGTTCGACCAAGAAAGTCATCTTGGAATACCTCTTGGAGCAGATTCAAGTTTGACTCTCGCACAGAAACAGAGGTTTACCATTCAGGAAATATCTCCAGAATGGGGTTATGCCACCGAGAATACAAAGGTCATCGTCACTGGATCTTTTCTTTGTGATCCCTCAGAGTGTGCATGGACATGTATGTTTGGTGACACTGAAGTTCCTGTACAAATCATTCAGGAAGGTGTCCTTCGCTGCCAAGCTCCTCCGCAAGTTCCCGGGAAAGTCACCTTTTGCGTTACGTCAGGAAATCGGGAATCCTGTAGTGAAGTAAGAGAGTTTGAATATCGTATTAAGCCAAGGAGCTGTGGTCATTGTAATTTTCCTCAAAGAGATGCTACTAAGAGCACAGAAGAACTGCTATTGCTTGTCAGGTTTGCACAGATGCTTCTGTGTGACCCATTGGTTCGGAAAGAAGATAGTGTCGAATCAGGAATTGATGTATTAAGAAAATCAAAAGTGGATGAAGATCCATGGGAACTTATTATAGAGGCACTCTTAGTTGGCAGTGAAACTCCATCCAGTACCATGGATTGGATTCTGCAAGAACTTTTAAAAGGGAAGTTGCAGCAGTGGCTTTCTTCCAAATACCAGGAAGAAGACATGCCAGGTTGTTCCCTGTCGAAGAAACAGCAAGGCATAATACACATGGTGGCTGGGTTGGGGTTTGAGTGGGCTTTAACCCCAATTCTTAATTCTGGGGTCAGTATAAACTTCCGTGATGTTAATGGATGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGGGAGAAAATGGTGGCTGCACTTATAGCTGCTGGTGCATCAGCTGGAGCAGTGACAGATCCCACTTCACAAGATCCAGCAGGTAAAACACCAGGTTCCATTGCTGCTGCCAGTGGCCACAAGGGACTTGCCGGATATCTTTCAGAGGTGGCACTAACTAGCCATCTTTCATCCCTCACACTAGAAGAAAGTGAGATTTCCAAAGGTTCTGCTGCTGTGGAGGCAGAGAGAACTGTTGAGAATGTCTCGAAGGGGAGCCTCGGGTACACCGAGGATCAGCTCTCACTTAAAGATTCATTGGCTGCGGTCCGAAATGCAGCTCAGGCTGCTGCACGCATACAATCTGCTTTTCGTGCACATTCTTTCAGGAGAAGGCAACAGAAAGAGGCTGCTGAGGGTGGTTATGATGAGTATGGTTTCGCTGCAGATGATATTCAAGGACTTTCGGCCGCATCAAAGTTGGCCTTCCGCAACCTTCGTGATCACAAGTTAGATAAAGCAGCTCTGTCTATCCAGAAGAAGTATCGTGGTTGGAAAGAACGGAAGGAATTTTTAGCCTTGCGCCAGAAAGTAGTGATGATACAGGCTCATGTGCGTGGGCATCAGGTCAGAAAGAAGTATAAGGTGTTTCTATGGGCTGTTGGTGTCCTAGATAAGGTTGTATTGCGGTGGCGTCGTAGAGGAGTTGGTTTACGAGGATTCCGTCCAGAGTCAGAATCTATTGATGAAAATGAAGATGAGGACATCCTTAAGGTTTTCCGGAAACAGAAAGTGGATGTGGCTATTAAGGAAGCTGTCTCCCAGGTGCTGTCCATGGTCGAGTCTCCTAAGGCACGGCAACAATACCGCCGCATGCTTGAAGGCTACCAGCAAGCTAAAGCTGACTTAGGTGGCAGCACTAGTGAATCAGCGACAATTTCTCAAGGCGATGGTGACAACATGGAGAACAACAATGATGAATTGTATAAGTTCCTGTTGGATTAA 3150 0.447 MESPGFDTNELVQEAQNRWLKPAEVLFILQNHQNHQLTEAPPQKPSSGSLFLFNKRVLRFFRKDGHIWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPNFQRRSYWMLDPACEHIVLVHYREIKEGRHSAGSTSHLSPGSSSTVSQSPSFYAAPNPGSTSAVSELYEPYRSSFSPGSVEVSSELVIGNNGMDHLDRTGRSGEFSSSPEAEVSQALRRLEEQLSLNDDDIAELSPYCGQNDKLKDSGVLDYERRSNQDEFAALQRGSAYRENDQHFSANAGILDDLDSRLFSQNSGDNRKQHHIQFGPEYTYERKESPFWKEMLEPRSGSTWIGSGDKNFNTLDESEKTPSSLETGKISANLAEQQKNCTSQGLDLSGNNAENKSNYYPISENNFSLQLSAARRFLLGSDNPIVSPTSTSMLQEIENSKISAYSSGISTHEANLDYYSMWFDQESHLGIPLGADSSLTLAQKQRFTIQEISPEWGYATENTKVIVTGSFLCDPSECAWTCMFGDTEVPVQIIQEGVLRCQAPPQVPGKVTFCVTSGNRESCSEVREFEYRIKPRSCGHCNFPQRDATKSTEELLLLVRFAQMLLCDPLVRKEDSVESGIDVLRKSKVDEDPWELIIEALLVGSETPSSTMDWILQELLKGKLQQWLSSKYQEEDMPGCSLSKKQQGIIHMVAGLGFEWALTPILNSGVSINFRDVNGWTALHWAARFGREKMVAALIAAGASAGAVTDPTSQDPAGKTPGSIAAASGHKGLAGYLSEVALTSHLSSLTLEESEISKGSAAVEAERTVENVSKGSLGYTEDQLSLKDSLAAVRNAAQAAARIQSAFRAHSFRRRQQKEAAEGGYDEYGFAADDIQGLSAASKLAFRNLRDHKLDKAALSIQKKYRGWKERKEFLALRQKVVMIQAHVRGHQVRKKYKVFLWAVGVLDKVVLRWRRRGVGLRGFRPESESIDENEDEDILKVFRKQKVDVAIKEAVSQVLSMVESPKARQQYRRMLEGYQQAKADLGGSTSESATISQGDGDNMENNNDELYKFLLD* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00261 1049 MobiDBLite consensus disorder prediction 135 162 - -
Eupl04g00261 1049 MobiDBLite consensus disorder prediction 194 215 - -
Eupl04g00261 1049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 874 937 IPR027417 -
Eupl04g00261 1049 ProSiteProfiles IQ motif profile. 886 913 IPR000048 GO:0005515
Eupl04g00261 1049 ProSiteProfiles Ankyrin repeat profile. 710 742 IPR002110 GO:0005515
Eupl04g00261 1049 SMART ANK_2a 710 739 IPR002110 GO:0005515
Eupl04g00261 1049 SUPERFAMILY E set domains 480 564 IPR014756 -
Eupl04g00261 1049 MobiDBLite consensus disorder prediction 1016 1037 - -
Eupl04g00261 1049 SMART iq_5 885 907 IPR000048 GO:0005515
Eupl04g00261 1049 SMART iq_5 827 849 IPR000048 GO:0005515
Eupl04g00261 1049 SMART iq_5 908 930 IPR000048 GO:0005515
Eupl04g00261 1049 Pfam IQ calmodulin-binding motif 888 906 IPR000048 GO:0005515
Eupl04g00261 1049 Pfam IQ calmodulin-binding motif 911 930 IPR000048 GO:0005515
Eupl04g00261 1049 MobiDBLite consensus disorder prediction 134 162 - -
Eupl04g00261 1049 FunFam Calmodulin-binding transcription activator 2 885 933 - -
Eupl04g00261 1049 Pfam IPT/TIG domain 480 563 IPR002909 -
Eupl04g00261 1049 ProSiteProfiles Ankyrin repeat region circular profile. 710 736 - -
Eupl04g00261 1049 FunFam Calmodulin-binding transcription activator 2 474 567 - -
Eupl04g00261 1049 Gene3D Immunoglobulins 474 570 IPR013783 -
Eupl04g00261 1049 SMART CG_1_2 11 129 IPR005559 GO:0003677
Eupl04g00261 1049 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 7 1017 - -
Eupl04g00261 1049 ProSiteProfiles IQ motif profile. 909 933 IPR000048 GO:0005515
Eupl04g00261 1049 Gene3D - 884 932 - -
Eupl04g00261 1049 Pfam Ankyrin repeats (3 copies) 697 770 IPR002110 GO:0005515
Eupl04g00261 1049 CDD IPT 480 564 - -
Eupl04g00261 1049 SUPERFAMILY Ankyrin repeat 679 771 IPR036770 -
Eupl04g00261 1049 MobiDBLite consensus disorder prediction 1016 1040 - -
Eupl04g00261 1049 Gene3D - 648 772 IPR036770 -
Eupl04g00261 1049 Pfam CG-1 domain 14 127 IPR005559 GO:0003677
Eupl04g00261 1049 ProSiteProfiles CG-1 DNA-binding domain profile. 8 134 IPR005559 GO:0003677
Eupl04g00261 1049 ProSiteProfiles IQ motif profile. 828 854 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00261 Eupl-Chr4 4179569 4216535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00261 466 1043 CAMTA Transcription Factor Family AT5G09410 41.091 1.18e-129 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Eupl04g00261 CG-1 1.7e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00261 K21596 - ming:122076843 1380.54