Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00245 ATGGCGAACTACTCAATACTCTTCCCTTCGTCATCATCATCAACAGCTTCTCCTTTCTCATCAGACATGGTAAATTTTAACGTTTTTACTGATCTTCATGGTAACAATCCAACTGGGTTCTCGGGATTGAAGACAGATATGGATGTTCCACGTCTGGATCATGATACAAACATTTCTCATCATAATATTGGTGGAAGCTTTGGTGGATCTGAGAGTGTGATGAAATCAGATAAAAAGAAGAATGAAAAGAAGGTTAGGAAGCCCAGATATGCTTTCCAGACAAGGAGCCAGGTTGATATACTTGATGATGGGTACAGATGGAGGAAATATGGGCAAAAGGCTGTGAAGAACAACAAACATCCAAGAAGCTACTATCGATGTACGCATCAAGGATGCAACGTCAAGAAGCAAGTCCAACGCTTATCTAAAGATGAAGGGATCGTGGTGACAACTTACGAGGGAATGCATACACATCCAATCCAGAAGTCTACAGACAATTTTGAGCATATCTTGAGTCAGATGCAAATCTACACCCCCTTTTAA 543 0.407 MANYSILFPSSSSSTASPFSSDMVNFNVFTDLHGNNPTGFSGLKTDMDVPRLDHDTNISHHNIGGSFGGSESVMKSDKKKNEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKHPRSYYRCTHQGCNVKKQVQRLSKDEGIVVTTYEGMHTHPIQKSTDNFEHILSQMQIYTPF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00245 180 Pfam WRKY DNA -binding domain 102 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g00245 180 MobiDBLite consensus disorder prediction 58 87 - -
Eupl04g00245 180 SMART WRKY_cls 101 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g00245 180 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 164 IPR044810 GO:0003700
Eupl04g00245 180 SUPERFAMILY WRKY DNA-binding domain 93 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl04g00245 180 Gene3D WRKY domain 85 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl04g00245 180 ProSiteProfiles WRKY domain profile. 96 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl04g00245 180 FunFam WRKY transcription factor 57 87 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00245 Eupl-Chr4 3941087 3945849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00245 89 180 WRKY Transcription Factor Family AT5G13080 83.696 1.74e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl04g00245 WRKY 1.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00245 - - nnu:104591762 257.684