Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00242 ATGGAGTTTTCTTCGTTTCTTCTTCGCTTCAGAGCTTCTGCAAATTCATTTCTATCTCAATACGAACCTCTCGCGCTGGTTCTCACTCCTCTGCTAGCTCTCTTCGTCGCTTGGATTCTTCAATCATTCCTCAACTTCGTTCAAGAAAAAGGACTCAAAGCAGCTCTTCTAGGGTTCCTCACGAACTCCGTCAAGTTGATACCTGGTGTGAAAAATTACATCGAAGCCGAGAAACAGAAGGTTGTGGAAAAGTTGCAATCTGGTGGTAAATCTAAAAGAGATAGTTGGCGGACTGAGCTGCCAAGGGTTGGACTTGGAGGAGGAGTCATAGAGAAGTTGAGAGATGAGAAAGGGAATGATGTGGTTTGGCAAGGGAAATGCTCGGGTACAGTGTACATTGGTGGAAGTGAGTCAGAGGGGCATTTTTCTTTGATTAACGAAGCTTATTCAATGTTTGCACATACCAATCCATTGCATCTCGATGTATTTCAAAGTGTAGTACGGTTTGAGGGGGAAGTTGTTGGAATGACAGCTGCACTGCTTGGGAGTAAAGAAAAGACTTCTGGCGGACAAATCTGTGGCAACATGACATCAGGAGGGACTGAAAGTATATTATTAGCTGTGAAATCATCGCGCGACTATATGAAAACAAGGAAGGGGATCACAAAACCTGAAATGATAATACCTGAATCTGCACATTCAGCTTACGACAAAGCTGCACAATATTTTAAGATCAAGCTGTGGCGTGTCCCTGTGAATAAAGAATTTCGAGCAGACGTCAAAGTGGTCAGACGATTTATTAACAAGAATACCATTTTAATTGTTGGATCTGCACCAGGCTTCCCACATGGCATCATCGATCCCATTGAAGAACTTGGTGAATTGGCTTTGAGTTTGGGAATTTGTTTGCATGTTGACCTTTGCCTTGGTGGCTTCGTATTGCCTTTCGCTCGTAAACTTGGGTACCCAATTCCACCTTTTGACTTTTCTGTTCAAGGAGTGACATCAATATCGGTTGATGTGCACAAGTATGGGTTGGCTCCAAAGGGAACAAGTATAGTTCTATACAGGAATCACGACATTAGAAAGCACCAATTCGTAGCTGTCACTGAATGGTCAGGTGGGCTATATGTTTCTCCAACCATCGCTGGGAGCAGGCCTGGGGGTTTGATTGCTGGGGCTTGGGCAGCCATGATAGCTCTAGGTCAAGAAGGATACTTGGAAAACACAAGAGAGATCATGGAAGTATCAAAGAGGATACAGAAAGGGATTAAGGAGATTCCTGAGCTATTTATCATTGGAAGGCCGGACATGACGATTGTTGCGTTTGGCTCGAATGACATAGACATTTTTGAAGTGAATGATATTATGTCGTCCAGAGGCTGGCATTTGAATGCGTTGCAGAAGCCTAACAGCATTCATATCTGTGTGACCCTTCAGCATGTTCCGGCTGTCGAATACTTCCTGAGAGACTTGCGGGAATCCGTGCAAACTGTAAAAGAAAATCCGGGTCCAATCAATGGAGGGCTTGCTCCGATCTATGGTGCCGCTGGGAGGATGCCCGATAGAGGTATGATTCAGGAGTTGTTAGTGAATTTCATGGACAGCTCTTGCTAG 1617 0.444 MEFSSFLLRFRASANSFLSQYEPLALVLTPLLALFVAWILQSFLNFVQEKGLKAALLGFLTNSVKLIPGVKNYIEAEKQKVVEKLQSGGKSKRDSWRTELPRVGLGGGVIEKLRDEKGNDVVWQGKCSGTVYIGGSESEGHFSLINEAYSMFAHTNPLHLDVFQSVVRFEGEVVGMTAALLGSKEKTSGGQICGNMTSGGTESILLAVKSSRDYMKTRKGITKPEMIIPESAHSAYDKAAQYFKIKLWRVPVNKEFRADVKVVRRFINKNTILIVGSAPGFPHGIIDPIEELGELALSLGICLHVDLCLGGFVLPFARKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSIVLYRNHDIRKHQFVAVTEWSGGLYVSPTIAGSRPGGLIAGAWAAMIALGQEGYLENTREIMEVSKRIQKGIKEIPELFIIGRPDMTIVAFGSNDIDIFEVNDIMSSRGWHLNALQKPNSIHICVTLQHVPAVEYFLRDLRESVQTVKENPGPINGGLAPIYGAAGRMPDRGMIQELLVNFMDSSC* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00242 538 FunFam sphingosine-1-phosphate lyase 1 138 402 - -
Eupl04g00242 538 FunFam Sphingosine-1-phosphate lyase 1 498 537 - -
Eupl04g00242 538 Gene3D Aspartate Aminotransferase, domain 1 109 501 IPR015422 GO:0003824
Eupl04g00242 538 FunFam Sphingosine-1-phosphate lyase 1 389 501 - -
Eupl04g00242 538 PANTHER - 34 538 - -
Eupl04g00242 538 Gene3D - 502 536 - -
Eupl04g00242 538 SUPERFAMILY PLP-dependent transferases 121 501 IPR015424 -
Eupl04g00242 538 Pfam Pyridoxal-dependent decarboxylase conserved domain 153 443 IPR002129 GO:0016830|GO:0019752|GO:0030170
Eupl04g00242 538 Gene3D - 135 402 IPR015421 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00242 154 496 Calmodulin-binding Proteins AT5G17330 25.895 1.62e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00242 K01634 - nnu:104591765 953.74