Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00231 ATGGATCCCAAGGGCTCAAAGCAGCCTCAAGAGGTACCCAAATTCTTGAGTCTCCCCCAACCAGACATGGGAGAAAATAAACCAGCAGAAATTAAAGATTTCCAGATTGTTATTGCAGAGAAAGATGAGGGGAAGAAGCAGTTAGCACCCAAGAGAAGCTCCAATAAAGACAGACACACAAAGGTGGATGGGAGGGGGAGAAGAATAAGGATGCCAGCTCTATGTGCAGCCAGAATTTTCCAGTTGACAAGAGAATTGGGCCACAAATCTGATGGGGAAACCATACAGTGGCTGTTACAGCAAGCCGAGCCATCGATCATCGCCGCCACCGGCACCGGAACAATACCAGCTTCAGCAATTGCTAACGCTGGGGGCTCTGTTTCTCAACAGGGGACCTCTGTTTCGGCCGGTTTGCATCCAAAGGTCGATGAGCTGGGACCGGATATTGGGTCTGCTAGTAGGGCCAATTGGACTATGGTTAGTGGTAATTTGGGCAGATCCCATGTGGCCACAGGCCTATGGCCCTCTGTCAGCGGATTTGGGGCGGGGTTTGTTCCGTCTTCGGGGCCGTCAACATCGAATTTGGGCAGTGAAAGCTCGAATTATTTGCCTAGAATTGGGTTCCATGGATTCGAATTGCCTGGTTCAAACCTGGGTCCAATGACTTTTAGCTCAATTTTGGGTGGAAATAACCAGCAACTTCCAGGTTTGGAGCTTGGACTTTCTCAAGACGGTCATATTGGGGTTTTGAATCCTCAGGCCTTGAATCAGTTTTACCAGCAGATAGGTCAAAGCCGAGGCGGTGCCGGCCCCATGCATCAGCAACAGCAGCAGCAGCAACAACAACAAGCTCCTGCTAAGGATGATTCTCAAGGGTCAGGACATTAG 888 0.5 MDPKGSKQPQEVPKFLSLPQPDMGENKPAEIKDFQIVIAEKDEGKKQLAPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASAIANAGGSVSQQGTSVSAGLHPKVDELGPDIGSASRANWTMVSGNLGRSHVATGLWPSVSGFGAGFVPSSGPSTSNLGSESSNYLPRIGFHGFELPGSNLGPMTFSSILGGNNQQLPGLELGLSQDGHIGVLNPQALNQFYQQIGQSRGGAGPMHQQQQQQQQQQAPAKDDSQGSGH* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00231 295 MobiDBLite consensus disorder prediction 1 29 - -
Eupl04g00231 295 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 32 232 IPR005333 GO:0003700
Eupl04g00231 295 MobiDBLite consensus disorder prediction 264 295 - -
Eupl04g00231 295 MobiDBLite consensus disorder prediction 42 66 - -
Eupl04g00231 295 ProSiteProfiles TCP domain profile. 55 109 IPR017887 -
Eupl04g00231 295 Pfam TCP family transcription factor 54 144 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00231 Eupl-Chr4 3728750 3731899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00231 1 294 TCP Transcription Factor Family AT3G27010 53.395 4.16e-87 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl04g00231 TCP 4.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00231 - - nnu:104592830 514.612