Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00207 ATGGGGAAAACCCCAGCTGAGAAATCCGGCAGTTTTTCCTGCCGAGACGACAAGAAACGCGACACAGATCCTTCTCCGTCACAGGGATCCACGGACGTCGTTGATCTAAAATCAGACCGTCCGCATGTCGTCGAGGAAGAGGTACAAGAGGAGACGGAAAAAACCGACGACTCCTCTGATCTCGATTCCAATCTCAGTAAACTCTCCGAAGAGATCGATCGGTTCCTTACTGTTCTCTCCACCGCTAAAGAAAGCCCTAACCCGCCGGAGATCCCGAGTTCCGTCGAGAAATTTGCGAAGCTCCTCGAAGTAGAGATCGCAAAGTACGATTCTGGGGAAGTTTCGGGAAAATGGCGTCAGGATTGCGACGATGAAACGCGTTTCCTCGAAGCGGTCGATAGGATCTCGAACCTGACTAATGCGCTCGGAGAGATCCATTCGAAGCCGAATTACGCTTCTTCCGTTAACCATACGAGCACTGTTTTACAGCGAGCGATGTCGTTCTTAGAGGAGGAGTTCCGATCACTACTAGAAGACTCTAAAAGCAGCGATTCGGATTCGTGTGATTTGAAAACAAGGCAATTGTCGTTTAACGATCACGATCGCTGCACCACACCGGAACCTGGCTCTGCTGGAGACGTAAAATTTCCTGGGTACTCGCCGGAGATTGCGTTCAATCTGAAAAGGATCGCATCGGCGATGATCTCGGCGGGCTACGACACGGAATGCTGTCAGGTTTACAGCATCGCGAGGCGAAATGCGTTCGAGGAGAGCTTAAATAAACTGGGTTTGGAGAAGATTAGCATCGACGACGTGCAGAAGATGCAGTGGGAATCTCTCGAATGCGAGGTCGCCACGTGGATCAAGGCCTTCAAACGCTGCGTCATCGTTTACTTCTCCGACGAACGGAAGCTTTGCGAGTCAGTGTTTTGCGGCAATCCGTCATTCTCCGGCAGCCTCTTCAGCAATCTTACACGCGGCATCGTCATACAGCTTCTCAATTTCGCCGAAGCCGTCGCCATGACGAAGCGATCAGCCGAAAAGCTCTTCAAATTCCTCGACATGTACGAAACTTTACGCGATCTGATTCTGGCCATGGACGAGTTATTTTCTGAAGAGTCTTCAGCGGAGCTAAAATCAGAAACTTCATCGGCTCGGTGCCGACTCGGCGAGGCTGCAATAAGCATTTTCTGCGATCTTGAGAACTCGATCAAGAGTGACACCGGCAAGACTCCGGTTCCTGGTGGCGCAGTTCATCCCTTAACCCGTTACACCATGAATTATCTAAAATACGCCTGCGAGTACAAGGACACGTTAGAACAAGTCTTCAAAGAACACCAAAAGATCGAACAATCGACTGTATCGGATGTGGAGAGTGATCCGCCAAACCACAGCAATCAGACGACGGAGAAGCCATCCCCGTTTTCATTACAGATAATGACAATTATGGATTTGCTTGAGTCGAATCTCGAGGCAAAATCAAAGGTCTACAAGGACCTGTCCCTAAGTTACATTTTCTTAATGAATAACGGCCGGTACATCATGCAGAAGATCAAGGGGTCGATCGAGATTCACAACTTGCTTGGAGACACGTGGTGTCGAAAACGATCGTATGATCTCCGGCAGTACCATAAGAACTACCAGAGAGAGACATGGAGTAAGGTCTTGGGATGTCTTAAAGACGAGGGTTTACAGGTACATGGGAAGATATCAAAGCCAGTGCTGAAGGAGAGGTTCAAGTCCTTCAACGCCATGTTCGATGAGATCCACAAGACGCAGAGCGCGTGGGTGGTGAGCGACGAACAGCTTCAATCGGAGCTTAGGGTTTCGATATCTGCAGTGATGATTCCTGCTTACCGATCGTTCTTAGGGAGGTTTCGACAATACTTAGACTCTGGGAGGCAATCAGAGAAGTACATAAAATATGGACCAGAAGATATCGAGACGTACATCGAGGAGCTGTTCGATGGAAATCCGGCATCCATGGTGAGGAGGAGAACGTGA 2004 0.493 MGKTPAEKSGSFSCRDDKKRDTDPSPSQGSTDVVDLKSDRPHVVEEEVQEETEKTDDSSDLDSNLSKLSEEIDRFLTVLSTAKESPNPPEIPSSVEKFAKLLEVEIAKYDSGEVSGKWRQDCDDETRFLEAVDRISNLTNALGEIHSKPNYASSVNHTSTVLQRAMSFLEEEFRSLLEDSKSSDSDSCDLKTRQLSFNDHDRCTTPEPGSAGDVKFPGYSPEIAFNLKRIASAMISAGYDTECCQVYSIARRNAFEESLNKLGLEKISIDDVQKMQWESLECEVATWIKAFKRCVIVYFSDERKLCESVFCGNPSFSGSLFSNLTRGIVIQLLNFAEAVAMTKRSAEKLFKFLDMYETLRDLILAMDELFSEESSAELKSETSSARCRLGEAAISIFCDLENSIKSDTGKTPVPGGAVHPLTRYTMNYLKYACEYKDTLEQVFKEHQKIEQSTVSDVESDPPNHSNQTTEKPSPFSLQIMTIMDLLESNLEAKSKVYKDLSLSYIFLMNNGRYIMQKIKGSIEIHNLLGDTWCRKRSYDLRQYHKNYQRETWSKVLGCLKDEGLQVHGKISKPVLKERFKSFNAMFDEIHKTQSAWVVSDEQLQSELRVSISAVMIPAYRSFLGRFRQYLDSGRQSEKYIKYGPEDIETYIEELFDGNPASMVRRRT* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00207 667 PANTHER EXOCYST COMPLEX PROTEIN EXO70 65 657 IPR004140 GO:0000145|GO:0006887
Eupl04g00207 667 MobiDBLite consensus disorder prediction 454 472 - -
Eupl04g00207 667 MobiDBLite consensus disorder prediction 35 49 - -
Eupl04g00207 667 MobiDBLite consensus disorder prediction 450 472 - -
Eupl04g00207 667 Pfam Exo70 exocyst complex subunit 286 653 IPR046364 GO:0000145|GO:0005546|GO:0006887
Eupl04g00207 667 Gene3D Exocyst complex component Exo70 113 665 - -
Eupl04g00207 667 MobiDBLite consensus disorder prediction 1 66 - -
Eupl04g00207 667 FunFam Exocyst subunit Exo70 family protein 111 663 - -
Eupl04g00207 667 SUPERFAMILY Cullin repeat-like 124 656 IPR016159 -
Eupl04g00207 667 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00207 Eupl-Chr4 3405070 3407541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00207 54 667 EXO70 exocyst subunit family AT5G13990 53.488 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00207 K07195 - nnu:104592808 866.685