Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00205 ATGGGTTGCTTCCCATGCTTCGATTCGAGAGAGGAAGAGGAGTTGAATCCTGGAAAAGCGAGTGATGATAAAAAGGAAGTCCAGCCAGTTGTGAACTCCAATGTTTCTAGATTGTCTTCAGGTGCAGACAGACTCAGATCAAGAAGCACTACTGGGGGATCAAGAAGGGAATCGTTGGGTCCAAAGGATGGGCCTGCTGTCCATATTGCTGCTCAGACATTCACCTTCAAAGAGCTTGCAGCTGCGACCAAGAACTTCAGGCCAGAGTCCCTTTTAGGGGAAGGTGGGTTTGGACGTGTTTACAAAGGGCGCTTAGAGAGCACGGGTCAGGTTGTGGCTGTAAAACAGCTGGATAGAGATGGGCTCCAAGGGAACAGAGAATTTCTGGTGGAGGTTCTCATGCTCAGCCTTTTGCATCACCCTAACCTTGTCAATCTGATAGGTTATTGTGCCGATGGTGACCAGCGTCTTCTTGTCTATGAATTCCTGCCCTTAGGATCATTGGAAGATCATCTCCATGATCTGCCACCTGATAAGGAACCGCTAGATTGGAACACAAGGATGAAGATAGCAGCTGGTGCAGCCAAAGGGTTGGAATACTTGCACGACAAAGCGAATCCTCCAGTTATCTACAGGGATTTCAAATCATCCAACATATTATTGGATGAAGGGTACCACCCGAAGCTGTCTGATTTTGGCCTCGCAAAGCTTGGTCCAGTTGGAGATAAGTCTCATGTCTCCACCAGGGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCCATGACCGGACAACTGACAGTGAAGTCTGACGTCTACAGTTTTGGGGTAGTCTTCTTGGAGCTAATTACTGGACGCAAGGCCATTGACAGCACCCGAGCTCACGGAGAACAAAACCTTGTTACATGGGCACGCCCCATGTTCAACGACCGCCGGAAATTTCCAAAATTAGCAGATCCGCGGCTGCAAGGTCGGTATCCAATGCGTGGGCTCTATCAGGCTCTCGCTGTGGCATCGATGTGTATCCAAGAACAGGCTGCCACCCGTCCTCTCATTGGGGATGTGGTGACCGCCCTGTCCTACTTGGCATCCCATGCATATGACCCCAATGCAGCTCCCGGACATAACAACAGAGGTAGTGGAGATAAGGATGAGAGAAGGAACAGAGGTGGTGCAACTGATGAGAGAGGCGGGCGGATTGGGAAGAACGAGGAAGGGGGAGGTTCTGGACGCAAGTGGGATTTGGAAGGTTCCGAGAGGGACGACTCTCCGAGGGAGACTGCGAGGATGCTGAACAGGGATCTGGATCGAGAACGAGCTGTTGCAGAGGCCAAAATGTGGGGAGAGAATTGGCGGGAAAAGAGGCGGCAAAGCGCACAAGGCAGTTTTGATGGAGGAAATGGATAA 1410 0.5078 MGCFPCFDSREEEELNPGKASDDKKEVQPVVNSNVSRLSSGADRLRSRSTTGGSRRESLGPKDGPAVHIAAQTFTFKELAAATKNFRPESLLGEGGFGRVYKGRLESTGQVVAVKQLDRDGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFLPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRAHGEQNLVTWARPMFNDRRKFPKLADPRLQGRYPMRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLASHAYDPNAAPGHNNRGSGDKDERRNRGGATDERGGRIGKNEEGGGSGRKWDLEGSERDDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSAQGSFDGGNG* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00205 469 CDD STKc_IRAK 92 360 - -
Eupl04g00205 469 MobiDBLite consensus disorder prediction 27 56 - -
Eupl04g00205 469 SUPERFAMILY Protein kinase-like (PK-like) 71 358 IPR011009 -
Eupl04g00205 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Eupl04g00205 469 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Eupl04g00205 469 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00205 469 MobiDBLite consensus disorder prediction 379 437 - -
Eupl04g00205 469 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
Eupl04g00205 469 Gene3D Transferase(Phosphotransferase) domain 1 163 376 - -
Eupl04g00205 469 MobiDBLite consensus disorder prediction 368 437 - -
Eupl04g00205 469 FunFam Serine/threonine-protein kinase PBS1 59 162 - -
Eupl04g00205 469 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Eupl04g00205 469 MobiDBLite consensus disorder prediction 7 26 - -
Eupl04g00205 469 MobiDBLite consensus disorder prediction 1 65 - -
Eupl04g00205 469 Pfam Protein kinase domain 89 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00205 469 PANTHER OS07G0668900 PROTEIN 3 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00205 Eupl-Chr4 3372537 3383373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00205 68 412 Glycoside Hydrolase AT3G07070 66.087 2.26e-167 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Eupl04g00205 Pkinase 5.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00205 K13430 - qsu:112033137 816.609