Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00190 ATGGGTTGTATTCTCGGCAAGACAACAGCCGGAGACGGCCAGAGACTAGATGGAGTTCCAGACCGTCGCGGCAAGGTCGAAAAATCTTCAGAATCAGTTAACAGCGTTACAATTAGGAAGGAGGGAATAAAGGACAGAAAGAAGATCCGCCGGAGCGGAGATTTTCTGGCGACGGAGAGTTGGAAACCGAAGCTGAATCAGTCGCTGAGAACTCATCATGGGTGGCCGGCGTGGCTATCTGCGGTCGCCGGAGACGCGATCAAGGGTTGGACTCCTCGACGGGCCGACACTTTCGAGAAGCTGGATAAGATTGGGCAAGGGACTTACAGCAATGTGTATAAAGCTAGAGATCTCATTACCGGAAAGATCGTTGCTTTGAAGAAGGTTCGGTTCGATAATTTAGAGCTGGAGAGTGTGAAATTCATGGCGAGAGAGATTCTTGTGTTGAAGCGGCTTGATCATCCAAATGTGGTTAAGTTGGAAGGTCTGGTTACTTCGAGAATGTCTTCTAGCCTCTATCTGGTTTTTGAATACATGGAACACGATCTCTCGGGGCTTACTGCTTGTCCAGGGATCAAGTTCACCGAGCAGCAGGTCAAATGCTATATGAAGCAATTACTGTCTGGGCTCGAGCATTGTCACAACCAAGGTGTCTTGCATCGTGATATCAAGGGTTCTAATCTGCTACTTGACAATGAAGGAATTCTTAAAATAGCTGATTTTGGACTGGCTACTTTTTATGATCCTGGCCATGGGCAACCCATGACTAGTCGAGTTGTCACCCTTTGGTATCGTCCCCCTGAGCTTCTTCTAGGGGCCACATATTATGGTGTTGGTGTTGACCTTTGGAGTGCTGGCTGCATTTTGGCGGAGTTGCTTGCCGGGAAGCCAATAATGCCAGGACGAACAGAGGTGGAACAGCTGCACAAGATTTTTAAGTTATGTGGGTCCCCATCAGAGGAATATTGGAGGAAGTCAAAGCTGCCACATGCAACTATTTTCAAGCCACAGCAGCCATACAAGCGCTGTATAGCGGAAACTTTTAAAGATTTCCCACCTTCTTCACTACCCCTGATCGAAACTCTTCTTTCAATTGACCCAGATGAACGGGGCACTGCCACTGCAGCTTTCAAAAATGAATTCTTCAACACAGAGCCCTATGCTTGTGAGCCGTCGAGCTTACCAAAATATCCTCCAAGCAAAGAAATTGATGTGAAATTGAGGGATGAAGCTAGAAGGCAAAGAGGCTTGAATGGGAAAGGAAATGTTGGTGATGGCGCAAAGAGAGTCCGAGCCCATGATCGGGGTGGTCGGGCCATTCCAGCTCCGCAAGCAAATGCCGAGCTCCAAGCAAACTTGGATCGGCGCAGACTAATGACGCAAGCAAATGCTAAGAGCAAGAGCCAGAAGTTCCCACCTCCCCATCAGGATGGAGCAGTTGTGTTTCCATTAGAAATGTCTCAGAACAGACCTGTATCTCTTGGTGCACCTGACACTTCTTCTACCTCATCAGTTTATAAACCGAAGTCATTAGGCGTCTTACATTTGGACCCCTTGAGGAATCCTGCAGTTGCTGGGGGACCTTCTAGGAGGAGGAAAGCCAAAAAAGAAGAGCTCCATATTGCTCAACCTCAGACTTTTATCCATACATTCAATCGATCCTCTATACGGGGCCCAAGAAATCCAAGATTTAAGGGTAAAGAATCGGTTTCTGAGGTTTTCGGACACTGA 1731 0.4766 MGCILGKTTAGDGQRLDGVPDRRGKVEKSSESVNSVTIRKEGIKDRKKIRRSGDFLATESWKPKLNQSLRTHHGWPAWLSAVAGDAIKGWTPRRADTFEKLDKIGQGTYSNVYKARDLITGKIVALKKVRFDNLELESVKFMAREILVLKRLDHPNVVKLEGLVTSRMSSSLYLVFEYMEHDLSGLTACPGIKFTEQQVKCYMKQLLSGLEHCHNQGVLHRDIKGSNLLLDNEGILKIADFGLATFYDPGHGQPMTSRVVTLWYRPPELLLGATYYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWRKSKLPHATIFKPQQPYKRCIAETFKDFPPSSLPLIETLLSIDPDERGTATAAFKNEFFNTEPYACEPSSLPKYPPSKEIDVKLRDEARRQRGLNGKGNVGDGAKRVRAHDRGGRAIPAPQANAELQANLDRRRLMTQANAKSKSQKFPPPHQDGAVVFPLEMSQNRPVSLGAPDTSSTSSVYKPKSLGVLHLDPLRNPAVAGGPSRRRKAKKEELHIAQPQTFIHTFNRSSIRGPRNPRFKGKESVSEVFGH* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00190 576 PANTHER CELL DIVISION PROTEIN KINASE 96 386 - -
Eupl04g00190 576 Pfam Protein kinase domain 98 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00190 576 MobiDBLite consensus disorder prediction 1 33 - -
Eupl04g00190 576 Gene3D Transferase(Phosphotransferase) domain 1 181 420 - -
Eupl04g00190 576 ProSiteProfiles Protein kinase domain profile. 98 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00190 576 SMART serkin_6 98 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00190 576 FunFam probable serine/threonine-protein kinase At1g54610 85 180 - -
Eupl04g00190 576 MobiDBLite consensus disorder prediction 551 576 - -
Eupl04g00190 576 FunFam probable serine/threonine-protein kinase At1g54610 181 421 - -
Eupl04g00190 576 SUPERFAMILY Protein kinase-like (PK-like) 92 387 IPR011009 -
Eupl04g00190 576 MobiDBLite consensus disorder prediction 518 538 - -
Eupl04g00190 576 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Eupl04g00190 576 Gene3D Phosphorylase Kinase; domain 1 85 180 - -
Eupl04g00190 576 CDD STKc_CDK9_like 98 382 - -
Eupl04g00190 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00190 Eupl-Chr4 3182552 3193411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00190 90 414 Core Cell Cycle Gene Families AT5G10270 52.786 1.11e-117 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Eupl04g00190 Pkinase 1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00190 K08819 - nnu:104592794 847.81