Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00169 ATGTCGGGAGCAACAGTGGAGCTCGATTTCTTCGGAATGGAGAAAGAAAACTCTTCGAAATCCCAGTTTCAAAAGTTAGTCGGGCAAAGAAGAACCGTTCGAGGCATTCAAACTGCCATTTCGAAGATCAATCCACAGCTTCTGAAGACTGTAATCGGATCCGGAGCTGCGAGCGGTTGTGTTGACGGGAGGTCGCAGGAACATGGAGGTTTTCTCAAGCAGGAACTGGTTTTCCGCTCAAATGGAGTTGTCTTAGCTTCGGAGAATCCGTTTTCTGTGCCTTCGACGCCAAAAGGGAATCAAAGCTTCCTTTCACCTCTACCGGTCTTCAATCCGATTCTCAGGACTGCTTCTGAGAGTCCTCCGGGAACACGTACTGCTCCTTTAACGATTTTCTACAACGGAACGGTCTCCGTCTTTGATGTTCCTCGCGATAAGGCGGAAATAATTATGAAACTTGCTGAGGAAGGAAAGTCGAAAACTGTTGAAGAATTTGTTGATTCCAAACCCGCAGTTTGTTCAACTCCAAATGACGAACGGAAGCTGCTTGAAAAACTCAATGGCGACCTGCCAATCGCCCGAAAGATGTCGCTGCAGAGGTTTCTTGAAAAGCGCAAAGAGAGGTACTTTTCTTTCATGGTTTTCATGGCGCACGATAGAAACAAACACACGACACTAATACACCTGTTGTTTTCGCGGGGATTTACTTTGAAATTTCCCAAAACGATTTTTATGTGTTTGTTTTCTGTTTTTCACCGACCCAACATCTCAAAATAA 777 0.4517 MSGATVELDFFGMEKENSSKSQFQKLVGQRRTVRGIQTAISKINPQLLKTVIGSGAASGCVDGRSQEHGGFLKQELVFRSNGVVLASENPFSVPSTPKGNQSFLSPLPVFNPILRTASESPPGTRTAPLTIFYNGTVSVFDVPRDKAEIIMKLAEEGKSKTVEEFVDSKPAVCSTPNDERKLLEKLNGDLPIARKMSLQRFLEKRKERYFSFMVFMAHDRNKHTTLIHLLFSRGFTLKFPKTIFMCLFSVFHRPNISK* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00169 258 ProSiteProfiles Tify domain profile. 122 156 IPR010399 -
Eupl04g00169 258 Pfam tify domain 126 154 IPR010399 -
Eupl04g00169 258 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 64 208 IPR040390 -
Eupl04g00169 258 Pfam Jas motif 191 210 IPR018467 -
Eupl04g00169 258 SMART tify_2 122 156 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00169 Eupl-Chr4 2910036 2913719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00169 1 208 Tify Gene Family AT5G13220 36.145 4.08e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Eupl04g00169 tify 2.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00169 K13464 - nnu:104591817 239.195