Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00160 ATGGCGTTCTCTGAGAACTCTCGACAATCTCTCATCCCAAGCTTCCTCTACTCCACCACTTCTACCAATAAAACCCTAGATTTGGAGAAATTGCTGAACAGAAACCCTAGTTTGCCTTCATCTCCACCATCTTCGTCGTCAAATGGAGTTCGGAAGAACTTCATCATTCCTGCTCCGAGCGAGCCCGGCAAGATCGAGATGTATTCTCCGTCTTTCTACGCCGCTTGTACCTTTGGAGGAATCCTTAGCTGTGGTCTTACTCATATGACCGTCACTCCTCTAGATCTCGTCAAGTGTAATATGCAGATTGATCCTGCAAAGTACAAGAGCATCTCGTCTGGTTTTGGGGTTTTGCTTAAGGAGCAAGGAGTCAAAGGTTTCTTCAGGGGTTGGGTGCCGACCCTGCTTGGTTACAGTGCTCAGGGGGCCTGCAAGTTTGGATTCTATGAGTTCTTTAAGAAGTATTACTCTGACATAGCTGGGCCTGAGTACGCAGCCAAATACAAGACCTTGATTTACCTTGCTGGTTCTGCATCTGCTGAAGTGATTGCTGATATCGCCCTTTGCCCCATGGAGGCTGTGAAGGTCCGGGTCCAAACTCAGCCTGGATTTGCCAGAGGGTTGTCGGATGGGTTTCCCAAGTTTGTGAGATCCGAAGGTTATCTTGGGCTTTACAAGGGGATTGTTCCTCTTTGGGGACGTCAGATTCCATATACCATGATGAAATTTGCATCTTTTGAGACCATAGTGGAGATGCTGTACAAGTATGCCATCCCCAGGCCGAAGGATGAGTGCAGTAAATCTCTGCAACTGGGTATCAGCTTTGCTGGCGGTTACGTTGCTGGTGTTTTCTGTGCTATTGTTTCTCACCCTGCCGATAATCTTGTCTCATTCCTCAACAATGCCAAGGATGCTACCGTCGGTGATGCTGTGAAGAAGCTAGGTTTGTGGGGTCTCTTTACTCGTGGGCTTCCTCTTCGTATTGTCATGATCGGAACCCTTACTGGAGCACAATGGGGGATCTATGACGCTTTCAAAGTTTTTGTTGGCCTGCCAACCACTGGTGGTGTTGCTCCTGCTGCTCCCGAACTCGTGAAGGTGTAA 1104 0.4837 MAFSENSRQSLIPSFLYSTTSTNKTLDLEKLLNRNPSLPSSPPSSSSNGVRKNFIIPAPSEPGKIEMYSPSFYAACTFGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGFPKFVRSEGYLGLYKGIVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKDECSKSLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKDATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAAPELVKV* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00160 367 SUPERFAMILY Mitochondrial carrier 74 344 IPR023395 -
Eupl04g00160 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 168 252 IPR018108 -
Eupl04g00160 367 MobiDBLite consensus disorder prediction 33 52 - -
Eupl04g00160 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 71 155 IPR018108 -
Eupl04g00160 367 Pfam Mitochondrial carrier protein 172 256 IPR018108 -
Eupl04g00160 367 Pfam Mitochondrial carrier protein 74 157 IPR018108 -
Eupl04g00160 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 269 348 IPR018108 -
Eupl04g00160 367 FunFam Phosphate carrier protein, mitochondrial 71 349 - -
Eupl04g00160 367 Gene3D Mitochondrial carrier domain 72 349 IPR023395 -
Eupl04g00160 367 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 44 359 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00160 Eupl-Chr4 2735227 2743115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00160 5 360 Chloroplast and Mitochondria Gene Families AT5G14040 81.868 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00160 K15102 - rcu:8273124 633.254