Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00155 ATGGCAATGGCAGTTGCTCTGCTACAGCTATGCATTTCCATGGAGGTAGAGTCCTCTCTATCTCTATCTGACAAAATTACTGAGTTACCTGGGCAACCCCAAGTGAGCTTCCAGCAGTTTTCAGGCTATGTCACTGTGGATGTTAAGAAACAAAGAGCTCTCTTTTACTACTTTGTTGAAGCAGAGATAGATCCAGCTTCAAAGCCTCTTGTTCTCTGGTTGAATGGAGGTCCTGGTTGTTCTTCTCTGGGAGTTGGGGCATTCTCTGAAAATGGACCTTTTAGACCAAGTGGAGAGGTTTTGGTCAGAAATGAGTATAGCTGGAACAAAGAAGCAAACATGTTATACTTGGAGTCACCAATTGGAGTTGGGTTCTCTTTTTCCACTGATACCTCCTCCTATGAGGCTGTGGGTGATAAGACAACAGCCAGGGACAATCTAGTGTTCTTGCAACGCTGGTTCCTCAAGTTTCCACAATACAAACAAAGGGATCTGTTCATCACTGGGGAAAGCTATGCAGGTCACTATGTTCCTCAACTCGCAGATCTCATGATTCAATTCAACAAAAAGGAGAAGTTGTTCAATCTGAAAGGAATTGCTCTGGGTAACCCGGTTCTAGAATTCGCCACTGACTTCAATTCGAGGGCCGAGTACTTCTGGTCTCATGGGTTGATATCAGATTCTACATACAGAATTTTCACCTCAGCCTGTAACTATTCTAGGTTCGTGAGCGAGTACTACAGGGGCTCTGTTTCCCCAGTTTGTTCAAGAGTGATGAGCCAAGTGAGCAGAGAAACCAGTAGATTTGTAGACAAGTACGACGTAACCCTCGACGTCTGTATATCATCGGTGCTCTCACAATCCAAGGTTATTAGTCCCCAGCAAGTTACCGAGACGATAGATGTCTGCGTGGAAGATGAAACAGTGAATTATTTAAACCGGCGGGATGTGCAGAACGCTCTCCATGCCCGTCTTGTAGGAGTCAGCAGATGGGCTGTTTGCAGCAATATCCTGGAATATGAGCTGCTTGACTTGGAGATACCTACAATCTCAATTGTCGGTTCACTCGTCAAGGCTGGAATCCCTGTCTTGGTTTACAGTGGAGATCAAGATTCTGTTATCCCATTGACCGGGAGTCGGACACTGGTCCATGGACTGGCAAAGGAGTTAGGACTAAACACAACTGTGCCTTACAGAGTTTGGTTTGAAGGGAAGCAAGTCGGCGGATGGACTCAAGTGTATGGTAATATCCTTTCATTTGCCACCATCAGAGGAGCTTCTCATGAAGCTCCATTCTCTCAGCCAGAGAGATCGCTCGTGCTGTTCAAGGCATTTCTGGAAGCCATGCCTCTACCAGAAGTGTTCTGA 1368 0.4591 MAMAVALLQLCISMEVESSLSLSDKITELPGQPQVSFQQFSGYVTVDVKKQRALFYYFVEAEIDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPSGEVLVRNEYSWNKEANMLYLESPIGVGFSFSTDTSSYEAVGDKTTARDNLVFLQRWFLKFPQYKQRDLFITGESYAGHYVPQLADLMIQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEYFWSHGLISDSTYRIFTSACNYSRFVSEYYRGSVSPVCSRVMSQVSRETSRFVDKYDVTLDVCISSVLSQSKVISPQQVTETIDVCVEDETVNYLNRRDVQNALHARLVGVSRWAVCSNILEYELLDLEIPTISIVGSLVKAGIPVLVYSGDQDSVIPLTGSRTLVHGLAKELGLNTTVPYRVWFEGKQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKAFLEAMPLPEVF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00155 455 Gene3D alpha/beta hydrolase 22 282 IPR029058 -
Eupl04g00155 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 24 435 IPR001563 GO:0004185|GO:0006508
Eupl04g00155 455 FunFam Carboxypeptidase 349 448 - -
Eupl04g00155 455 ProSitePatterns Serine carboxypeptidases, serine active site. 167 174 IPR018202 GO:0004185
Eupl04g00155 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 104 116 IPR001563 GO:0004185|GO:0006508
Eupl04g00155 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 127 IPR001563 GO:0004185|GO:0006508
Eupl04g00155 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 178 IPR001563 GO:0004185|GO:0006508
Eupl04g00155 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 418 431 IPR001563 GO:0004185|GO:0006508
Eupl04g00155 455 FunFam Carboxypeptidase 19 452 - -
Eupl04g00155 455 Gene3D - 350 448 - -
Eupl04g00155 455 ProSitePatterns Serine carboxypeptidases, histidine active site. 418 435 IPR033124 GO:0004185
Eupl04g00155 455 Pfam Serine carboxypeptidase 30 447 IPR001563 GO:0004185|GO:0006508
Eupl04g00155 455 SUPERFAMILY alpha/beta-Hydrolases 26 451 IPR029058 -
Eupl04g00155 455 Gene3D - 303 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00155 Eupl-Chr4 2642748 2645892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00155 311 451 Calmodulin-binding Proteins AT2G22960 26.950 5.88e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00155 K16297 - nnu:104591835 831.247