Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00154 ATGGCTCAGGAAGAAAAAGAGGAGCCTGCCATCATCACTCAAACCCTAGATTCACTAGCCAACGATCCACATGAAAGAGAGGACAAGAAGGATCTCAATCTCGCATCGGACGTATCTGGAGGTCCATCGCCGTTTTCCATCAATTCTCGTGTGTTGTATTTGTTAGGAGACATAACGGGGGGTCCGGTGTTTTGTTTCGCTCAATGGTTGGATTCCGTTCGTAAGCGCACTGGAAGATATCGCTCTTCTGGCTTCCCCAACCGCCCTCCGAAATTCAAAACTATGCCATTGAGTGCAGGAGAACCAATTGCAGAATCAAGATGTTTACAGTCTTCTGAGCAAGCTTCAGATATCAGTTTGTGGGAAAGACTTGGTAAAGCTGCTATGTTTGATGTCGAGTCGAGTGAGTTTTCTTGGGACATGCTGTCTTCCCTACATCATACTGAACATAGTAGTAGCACTGAACATTCTGAGGATGAAACGAATAGAGCTCTTGAGGTCACTGTGAATTCTGGGGGAGTTGTTTTCTTTGCCCTATTCAATAGGCCTGTGAATGATGATTCTTTCCCAAAGGAAGCTGCATCAGTCATTAAGATATCCTCTTCAAGGATGGCCACACAATCAGAACGCCTGGGTTATGAATTCGCAAAATTGCTCGGAGTCCAAACTCCACAAGCTAGAGTGGTTCACAATTTTAGCCCCGAATGGCAACAGATCAAGGACGGTGCAGAAAAAGCAAGGCATGTGGCAATAATGGAGGGAGATGATGTTGGTGAAGTGACATGTTCAGAGCTGTTGGAAGCTCTCGAACTGAGCAGATGCCTTTTTCTGATGAATTATGTTCATGGATCTCCTCTGCTAGAAAGCGCAAGTGCATTTGATTCGCAGGAAGCTGCTGAAAGGACAGCGGCAGCCCTTGGCAGGATCTTGATGTTGGACCTTGTTATCAGGAATGAAGATAGACTCCCTTGTCGTCAGCTCGGGTGGCGGGGGAATTCTGCAAATCTACTGTTTGCTGACAAGGTGACCTCTACAAACATGGATGCACTGAAGGAAGCCTTTGATTCCGTAACCCAAAGATATAAGCCTAGGGTAATTAGGACTGGTCGGAAAGAGAGAAGAGCCAACCCGGATTATGGCAGATTGAACACTTGTAAACCCGAACTTATATCTCAAAGCCCAGATATTTCGAATATAATGACTCCACCTAAATCCACTAACATGAACCCAAAAAACCAGAACTCCAAACCTGGTGATTTCCATATTGTTGCAATTGACTCTGGTATTCCTCGCCGTCCTCCTGCTGGGAAACGTGCAAATGACCATGCCCATTATCCTAAGCTAGTTGAGCTCCTTCTCAACAGTGTCGAGTACTCCTCAAGCCTCTTGCATGACATAACAGGGGGAAAAGTAGGGTGTCCTTTATCAGAAGAGGCTGATGGACAGACTGATTTGTGTTTATCTGACATTACCACAGTTAATGAATTCCGAAGTGGGTTTCGTGCAGCTCTTAGGGACCTGCTGGGATTCCATATATTTCTTCTTACACTTTATCAGAAACTGGACAGCCTCTTAAGATTGTTTCTGACAAATATGAACAGAAGTTCATCAGGGGATTTTGACAAGGAGGATTTTGGGGTTCCCGATTCACCATCACATGCAGCTGTAGCTGGTGCTCACTTCTTCTCCCTTGCATGTAAGGAACGGTTCGTCAGTGAGACTCATGTGGATTTAAGTGATTCGGAATTGCAGAGAACAGCTCCCAGGTCATCACCTCCGGTACCTCCGGTGTACAAAGAAAGCCCAGACTCCATTTATCCCATCTCACGGGAGAATTGGCATGGAAAGTACTTCAAAGGGAGTGGAGAGCCTCTTCGTAGCCTTCGGCTGACAGCAAAGCTCCGTGATTTTAACAAATATGCCAAGGTTGATCCCGAATTAAACAGAGAACTGGAACAGTGGAATGATATGCTCAGAACAGATGCTGTTAAATTGTGCCAGGAGAATAATTTCAATACAGGTTTTTTTGAAGGGAGTGAAAATAACAGCGTTGTAGATGCTTACGAGTTGAAGGTCAGACTTGAGCACATTCTCGAGAGGATAGCGTTAATATCTGATGCTGCAAACACGGAGAGGCCTTCTTTGATTACAAGCAACCTTTTTATTGGTGGAGCTATGGCCGCAAGATCTGTATACACTCTTCAACATTTGGGCATCACACATATACTGTGCTTGTGCTCAAATGAAATTGGACAGTCTGATTCTCAGTATCCTGATCTTTTTGAGTACAAGAATTTCTCAATATGCGATAATGAGGATACCAGAATCAGCAATATCTTTGAAGAAGCTTCTGATTTCATCGGAAATGTTGAGAACTTGGGCGGGAGGGTTCTGGTTCATTGTTTCGAAGGCAGAAGTAGAAGTGCCACAGTTGTTCTTGCTTACTTGATGCTTAGGAAGAATTTCACTCTGTTACAAGCATGGAATACCCTAAAAATGGCCCACCGCAGGGTGCATCCCAATGATGGATTTGCGAAGATCCTTTTGGATCTAGATAGGAAACTGCATGGGAAGGTTTCAATGCAGTGGCAGCAGAGGAAGCCAATTATGAAACTGTGCCCCATCTGTGGGAAGAATGCAGGTCTGAGCAGTAACTCGCTCAAGCTCCATGTGCAAAAGTCTCACAGAAAGATCTCATCGGGGAGTGTGGACAGCGCCATGACCATGGAAATACAGAAGGCTTTGAGTGAGCTCAAGATGGGCAGAGGTGGAAGCGTCAGCCCAACTAAGAAGCAGTCGCATTCAATCATTGGAGGATTTGATCAACAATTTAACTGA 2838 0.45 MAQEEKEEPAIITQTLDSLANDPHEREDKKDLNLASDVSGGPSPFSINSRVLYLLGDITGGPVFCFAQWLDSVRKRTGRYRSSGFPNRPPKFKTMPLSAGEPIAESRCLQSSEQASDISLWERLGKAAMFDVESSEFSWDMLSSLHHTEHSSSTEHSEDETNRALEVTVNSGGVVFFALFNRPVNDDSFPKEAASVIKISSSRMATQSERLGYEFAKLLGVQTPQARVVHNFSPEWQQIKDGAEKARHVAIMEGDDVGEVTCSELLEALELSRCLFLMNYVHGSPLLESASAFDSQEAAERTAAALGRILMLDLVIRNEDRLPCRQLGWRGNSANLLFADKVTSTNMDALKEAFDSVTQRYKPRVIRTGRKERRANPDYGRLNTCKPELISQSPDISNIMTPPKSTNMNPKNQNSKPGDFHIVAIDSGIPRRPPAGKRANDHAHYPKLVELLLNSVEYSSSLLHDITGGKVGCPLSEEADGQTDLCLSDITTVNEFRSGFRAALRDLLGFHIFLLTLYQKLDSLLRLFLTNMNRSSSGDFDKEDFGVPDSPSHAAVAGAHFFSLACKERFVSETHVDLSDSELQRTAPRSSPPVPPVYKESPDSIYPISRENWHGKYFKGSGEPLRSLRLTAKLRDFNKYAKVDPELNRELEQWNDMLRTDAVKLCQENNFNTGFFEGSENNSVVDAYELKVRLEHILERIALISDAANTERPSLITSNLFIGGAMAARSVYTLQHLGITHILCLCSNEIGQSDSQYPDLFEYKNFSICDNEDTRISNIFEEASDFIGNVENLGGRVLVHCFEGRSRSATVVLAYLMLRKNFTLLQAWNTLKMAHRRVHPNDGFAKILLDLDRKLHGKVSMQWQQRKPIMKLCPICGKNAGLSSNSLKLHVQKSHRKISSGSVDSAMTMEIQKALSELKMGRGGSVSPTKKQSHSIIGGFDQQFN* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00154 945 ProSitePatterns Tyrosine specific protein phosphatases active site. 799 809 IPR016130 GO:0016311|GO:0016791
Eupl04g00154 945 Gene3D Protein tyrosine phosphatase superfamily 695 867 IPR029021 -
Eupl04g00154 945 MobiDBLite consensus disorder prediction 926 945 - -
Eupl04g00154 945 Pfam Actin-fragmin kinase, catalytic 116 429 IPR015275 -
Eupl04g00154 945 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 38 936 IPR035010 GO:0004721|GO:0009737|GO:0043622
Eupl04g00154 945 ProSiteProfiles Dual specificity protein phosphatase domain profile. 712 857 IPR020422 GO:0006470|GO:0008138
Eupl04g00154 945 CDD DSP 713 850 - -
Eupl04g00154 945 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 712 857 IPR029021 -
Eupl04g00154 945 MobiDBLite consensus disorder prediction 581 601 - -
Eupl04g00154 945 MobiDBLite consensus disorder prediction 921 945 - -
Eupl04g00154 945 Pfam Dual specificity phosphatase, catalytic domain 721 852 IPR000340 GO:0008138|GO:0016311
Eupl04g00154 945 SUPERFAMILY Protein kinase-like (PK-like) 68 443 IPR011009 -
Eupl04g00154 945 MobiDBLite consensus disorder prediction 1 38 - -
Eupl04g00154 945 FunFam Dual specificity protein phosphatase PHS1 684 858 - -
Eupl04g00154 945 SMART dsp_5 712 854 IPR020422 GO:0006470|GO:0008138
Eupl04g00154 945 MobiDBLite consensus disorder prediction 20 34 - -
Eupl04g00154 945 Gene3D - 285 371 IPR036940 -
Eupl04g00154 945 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 777 832 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00154 Eupl-Chr4 2618455 2628520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00154 24 923 Protein tyrosine phosphatase (PTP) family AT5G23720 61.538 0.0 1102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00154 K14165 - nnu:104591836 1323.15