Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00144 ATGGTCTGTAATTCCGATTTCAGAGTTATGTTCTCTTCTTCCATGGATAAGAGAAGTTCTGAAACCTGTTTGAACAGGAAAACCCTAAACCAGACGCTTCTTGTTCTATTTCTCTTCTGCTTTAACCATACTGTCCAATGCGAGGAAACAATGACTGAACACATCTTTGCTGAATCGCCATCTCAATCTAGGGTTCCCGAATTCAAGAATGGCTTGCGGAGGATTATCCTTGGCATTTTGTTTGGATGTTTGACCGGATTAATCGTTGCAATCCTTTTTGCTTGTTTAGTCCGATTCTTTATTCGGTTCATGAACAGAACCCCAATTCTCAAAGGTCCAGTCGTCTTCTCCCCTAAAATTGCTCCCAGAACACTCCAATTGGCCCTCTCGAATGAAAACCAGTTGCTTGGCTCGAGCCCGAATGGGAAGTACTACAGAACCGTTCTCGACAATGGGCTCACAATCGCAGTCAAGCGGCTTGAGCCCTTCGAGACTGGTTCTCCAGAAACTCAGAACAAATCCGTCAAGAGACGTATACAGCAAGAGCTGGAAATGCTGGCTGGCGTGAGGCATCGGAATCTGATGAGCTTACGAGCTTATGTTCGTGAACCCGATCGGTTCTTTCTGGTTTACGATTATGTGCCAACTGGCAGCCTTGAAGATGCCATGAATAGAGTCCGCACTAACCAGCTGCAACTCAGTTGGGAAGTCCGGCACCGGATTGCAGTTGGAGTGATTAAGGGACTCCAGTATCTTCATTTTAGCTGCAGCCCCAGAATTCTGCATTACAATTTGAAGCCTACAAATGTAATGTTGGACGCGGAGTTTGAACCAAGGCTAGCAGATTGCGGGCTGGCTCATCTCATGCCCAATTTGGGTAGAACAACCTCAGGCTACACTGCTCCAGAGTGTTTCCAGAATTGCAGATATACCGAGAAGAGCGACATCTTCAGTTTTGGGGTAATTTTGGGTGTTCTGTTAACTGGGAGAGACCCTTTAGATCCCTTCTTTGGGGAAGCATCAGGTGGGGGGAGTTTGGGGCGGTGGCTCCGCCACTTGCAGCAAGCAGGGGAAGCACGAGAAGCATTGGATAAGAGCATTCTAGGGGAAGAAGTAGAAGAGGATGAGATGCTGATGGCAGTGAGAATTGCCGTCGTGTGCTTGTCAGACTTGCCGGCCGACCGGCCTTCGAGCGATGAGCTTGTTCCCATGCTCACCCAACTGCACAGCTTTTGA 1236 0.4806 MVCNSDFRVMFSSSMDKRSSETCLNRKTLNQTLLVLFLFCFNHTVQCEETMTEHIFAESPSQSRVPEFKNGLRRIILGILFGCLTGLIVAILFACLVRFFIRFMNRTPILKGPVVFSPKIAPRTLQLALSNENQLLGSSPNGKYYRTVLDNGLTIAVKRLEPFETGSPETQNKSVKRRIQQELEMLAGVRHRNLMSLRAYVREPDRFFLVYDYVPTGSLEDAMNRVRTNQLQLSWEVRHRIAVGVIKGLQYLHFSCSPRILHYNLKPTNVMLDAEFEPRLADCGLAHLMPNLGRTTSGYTAPECFQNCRYTEKSDIFSFGVILGVLLTGRDPLDPFFGEASGGGSLGRWLRHLQQAGEAREALDKSILGEEVEEDEMLMAVRIAVVCLSDLPADRPSSDELVPMLTQLHSF* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00144 411 Pfam Protein kinase domain 132 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00144 411 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 214 410 - -
Eupl04g00144 411 ProSiteProfiles Protein kinase domain profile. 130 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00144 411 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 122 213 - -
Eupl04g00144 411 SUPERFAMILY Protein kinase-like (PK-like) 134 405 IPR011009 -
Eupl04g00144 411 CDD STKc_IRAK 136 408 - -
Eupl04g00144 411 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 42 406 - -
Eupl04g00144 411 Gene3D Transferase(Phosphotransferase) domain 1 214 410 - -
Eupl04g00144 411 Gene3D Phosphorylase Kinase; domain 1 119 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00144 Eupl-Chr4 2472631 2476144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00144 45 408 Receptor kinase-like Gene Family AT2G31880 33.090 5.10e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Eupl04g00144 Pkinase 2.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00144 - - nnu:104591850 640.188