Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00142 ATGGATCATGATAAGTTGGAGGCTCTTCGAGAAAAGGTAATTGCAGAAAAGATGGTGATCAGCAAAGATTATATGGGTGCCAGAGACAACTTACTCAAAGCAAAACAGCTCTTTCCAGCACTCGATAACATCAGTTCAATGCTAACTGTCTGTGACATACTATGTGCTGCCAGCATCAAGTTTCCAGGGTGCGGAATCGATTGTTACTGGGTTCTTCAGCTCCTGCCCTCAGCCAATGATTCTGAGATAAAATCCCGGTATCAGAAGCTTGCCACCCTCTTGCAACCCATCAAGAACAAGTTCCCTGGAACCGAATCGGCTCTGAAACTCATACGCGATGCATTCTATGTGCTTTCAGATCGAGAAAAACGTTCTGCATTCGATTTGAAGAGGGGTGCAAGCTGGGCAGTTTGTGGGTCTTTGAATTTGCAGGCATCTTCCAATCAGGAAACCACAAATAAGGAAAGGGTTGCTACTGCACAAAGTTCTTCCGGGTATAAAAGGGTTTCTGCAAGTGATAGTTCATATGAAAGCAATGGGGAGGGTATTTCAAGAGAGATGCTTTCGAAGAGGATAAGAGATTCAAACCCCACTCTACTAGGTAACAATGACATCGATAAACAACAGGAGAAAATCTGTCCCCGAGAAGCCACTTGGGTTTCTGCTTTCATGACCTCTAAAGGGAATATAGAAGTAGATAGACCTGCAGGCAATTTAAGTTCTCCAACGACAACGCATTCTACCAGTTTGAACAGGAACCCATCCTGGTCTTCAAAAACTCTGGCTCAGGAAAAGCCTGAATGGAACTATTACAACTTTGAGAATGAGAGAAAGACTCAGGTTTTCGAAGTGGGCCAGATATGGGCTGCTCAATATAAAGCAATTGTGCCTCGTCGATATGCACATATCAATATCAAGTCAGAGTGTGCATTGTGCGTTACATGGTTGAAACCAGTCCCATTTACCGCAGACGAGAGGAGATGGTGTGAGGCGGGCTTGCCGGTTGCTTGTGGGTCCTTTGATCTGGATCCCGAAATGAGTGAAGAGAAGGTGAGCAGGTCAATGGTATTTTCTCAGATGTGTTCTTGGGTTCACGGTGTAACAGAGGAACAATTTGAGATTTACCCCAAGAAAGGTGAGGTTTGGGCAATTTACAAGGATTGGGACCTATTTGAATGGTCGTCCAATCCTGAAATGATGGAAGGATGCAAATTCGAAATAGTAGAAATCCTCACAGATTATTCGAAGTACGTGGGAGTAATTGTCACATGCTTGGTGAAGGTTCAAGGATTCAGGTGCATCTTCCAAAGACATACAGACAAGGGAAATCAATTCACCTCTCACATCCTCCCGAGCAAATTATACATGTTCTCTCACAATGTTCCAGCATTTCGGTTTATAGGCGGAGAGATGGATAGAGTTGTAGACGGGATGTTTGAGCTGGACCCATTGGCCTTGCCCGATGATATGGTCAGCCCCAAATTCCCAAAGGAAGGCAGTTCTACCAACTTGTCTAGCTTTACCCAGCATCCCGAAGGTCTTCCTCCCATAAGATCATATCCGGGGACCCAATCCTTGAATACCAGTTGGTCCAGAAATGAATTTTCAGTTGGTCAGATATGGGCTGTATACAGTGGTACTGATGTCATGCCTCGGCGGTACACCCGGATAGACAACATAGTTTCAGCAAGCCAAGTATGTGTGACATTCTTGGAACCACACCCCATTCTGGACTCTGAGATCCATTGGCAGATAGAAAACCTACCCATTGTATGTGGAACATTTAGAGTAGGTAAAACCACTCACAACTTGGAAATGTCACGTTTCTCCCACTCAGTGAAGTGCCAACGAAGCACAAATAAGTTTTTCTACAGGATTTATCCGAGGAAAGGCGAAGTTTGGGCTATGTACAGGAATTGGAACAAGAAGTGGAATCAATCTGATTATGAAAATTACGAATGCCGGGTCGTTGAGATCCTTTCAGATTTCTCAGAGGAAAAAGGGATGAGAATAGCCAGGTTGGTAGAGGTGAAAGGTTGTATGACCTTCTTCCAAAGACAAAAGTACGATGGGTTTGAGTTGACCCGTTCAGTCTCTAAAACAGAGATGATTAGTTTCTCTCACCGCATTCCAACTTTCAAGGTTCCAGGAATCGGAGGCTACGGCATTCCCGAAGGCTCTTGGCACTTGGAACCTGATGCATTGCCTCCTAAGCTTAGGTTGAAGACTCTGAAAGGACGAGAGGAAAGCCAAAAATGA 2259 0.4458 MDHDKLEALREKVIAEKMVISKDYMGARDNLLKAKQLFPALDNISSMLTVCDILCAASIKFPGCGIDCYWVLQLLPSANDSEIKSRYQKLATLLQPIKNKFPGTESALKLIRDAFYVLSDREKRSAFDLKRGASWAVCGSLNLQASSNQETTNKERVATAQSSSGYKRVSASDSSYESNGEGISREMLSKRIRDSNPTLLGNNDIDKQQEKICPREATWVSAFMTSKGNIEVDRPAGNLSSPTTTHSTSLNRNPSWSSKTLAQEKPEWNYYNFENERKTQVFEVGQIWAAQYKAIVPRRYAHINIKSECALCVTWLKPVPFTADERRWCEAGLPVACGSFDLDPEMSEEKVSRSMVFSQMCSWVHGVTEEQFEIYPKKGEVWAIYKDWDLFEWSSNPEMMEGCKFEIVEILTDYSKYVGVIVTCLVKVQGFRCIFQRHTDKGNQFTSHILPSKLYMFSHNVPAFRFIGGEMDRVVDGMFELDPLALPDDMVSPKFPKEGSSTNLSSFTQHPEGLPPIRSYPGTQSLNTSWSRNEFSVGQIWAVYSGTDVMPRRYTRIDNIVSASQVCVTFLEPHPILDSEIHWQIENLPIVCGTFRVGKTTHNLEMSRFSHSVKCQRSTNKFFYRIYPRKGEVWAMYRNWNKKWNQSDYENYECRVVEILSDFSEEKGMRIARLVEVKGCMTFFQRQKYDGFELTRSVSKTEMISFSHRIPTFKVPGIGGYGIPEGSWHLEPDALPPKLRLKTLKGREESQK* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00142 752 SUPERFAMILY Chaperone J-domain 64 130 IPR036869 -
Eupl04g00142 752 CDD DnaJ 67 120 IPR001623 -
Eupl04g00142 752 Gene3D DnaJ domain 66 187 IPR036869 -
Eupl04g00142 752 Pfam DnaJ domain 67 128 IPR001623 -
Eupl04g00142 752 SMART dnaj_3 66 123 IPR001623 -
Eupl04g00142 752 MobiDBLite consensus disorder prediction 236 258 - -
Eupl04g00142 752 MobiDBLite consensus disorder prediction 148 182 - -
Eupl04g00142 752 PRINTS DnaJ domain signature 87 102 IPR001623 -
Eupl04g00142 752 PRINTS DnaJ domain signature 103 123 IPR001623 -
Eupl04g00142 752 PRINTS DnaJ domain signature 69 87 IPR001623 -
Eupl04g00142 752 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Eupl04g00142 752 PANTHER ENDOSOME ANTIGEN-LIKE PROTEIN, PUTATIVE (DUF3444)-RELATED 147 740 - -
Eupl04g00142 752 Pfam Domain of unknown function (DUF3444) 531 716 IPR024593 -
Eupl04g00142 752 Pfam Domain of unknown function (DUF3444) 266 468 IPR024593 -
Eupl04g00142 752 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00142 Eupl-Chr4 2427285 2431799 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00142 4 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.338 8.33e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00142 - - tss:122644664 901.353