Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00140 ATGGACTGCGATAAGGTGGAGGCTGCTATTCGAGAAAAGGAGACTGCAGAAACAATGATTGAAAACTGCGATTACATGGGTGCTAGGGAGAAGTTAATCAAAGCGTGTAATCTTTTTCCAGCACTTGATAACATATCTCAAATGATAACTGTCTGTGACATACTATGCACCACCGACTTTAGGTTACCAGGCTGTGTGACCGATTGGTATTGGGTTCTCCAGACCAATGCAGCAGCAGATGAATCTCACATAAAATCTAAGTATCTGATGCTCACCAATCTCTTGGAACCCATAAAAAATAAGTTCCCTGGCACCAAATCTGCTCTGACACTTGTCCACAAGGCATTTTCTGTGCTTTCAGATAAAGAAAAGCGATCAGAGTTTGATTCAAAGAGGGCTGTGAGCTGGGATCTTCATGGATCTGTGAATTTGCAGGAACCATCTGATCTTGAAATAATGAAGGAGGAAAGGACACCTACTTCACAAAGTTCTTCTGGGTGTAAAAGGATTTTTAGTGAGATTTCAGATAGAAGTAATGGAGTGAGCAATTCAAGAAAGCTTCCTTCAAAGAGACTAGGAGATTTAGGTGGGGTGCGGAATTCTGCTATGTCTATGGGATCTGAGGTCTTAGCTGTCTCCCATGCCATTGATGAACAGAGGGAGAAAATTTGTGCCCAAGAAGTGAGCTGGGTTCCTGCTTGCATCAACAATATAGGGAATGCAGGAGTGAAGAGACCAGTAGGTAGTATGGGTTCCCCAATGGGTTTTGGAAGTTCATTCGGGAGCCCATCCTGGTCAATGAATTCCATGACTTGCAAGGGGCCTGATCCAGACTATTACGACTTTGATAAAAACAGAAAGGCTGAGTTATTTGCAGTGGGTCAGCTTTGGGCTGCTTACGATCAAGAAAATATGCCTCGAAACTATGCTCGAATCAATAGCATTGGACACTCACCCTTCAAATTGTGCATTACACGGTTGAAACCAGCACCTGTTACTGCAGATGAGAGAAGATGGTGTGAGGTGGGCTTGCCTGTTGCCTGTGGGCCCTTTGACCTGGATAGGAGTAATATGGTGGTGGGTGGACGAATGGTGTTTTCCCATATGGTCTACCAGGTTCAAGGCTTAACAAATGAGCAAGTCGAAATTTACCCCCAAAAAGGTGAGGTTTGGGCAATTTATAGAGATTGGCAACCATTTGATTGGTGCTCTGATCCTGAAACAATGAAGGGATGCAGATTCCAGATGGTAGAAATCATCACAGGTTATTCGAAGCAGAAGGGTGTGATGGTTGCAGGCTTGGCAAAGGTAGAGGGATTCAAAAGCATTTTCCAGAGATATTCGAACAAAGGGAGTGAATTCTCTTTCCAAGTTCCTGTGAACGACTTGTTCATGTTTTCTCATAAGGTCCCAGCATTTATATTTAAAGGTGGAGAGAGGGACAAAGTTTCAGATGGGATGTTCGAATTGGACCCATTGGCTGTTCCTGGGGATTTTATCGGGGATATGGCTAAACCATCAGAGGAAGGGAGTTCTAGCAATTGTTCCAGCTTAACCCACCACTCATCGCTTACTCCTCCCATAAGTTCAGGGGGCGACACCAGATCCTTGAAGCCTAAATGGTCATGGAAGGATTTTACATCAGATCAGATATGGGCCATTTATGATGGTCCGGATTCTATGCCTCGACGATATGCTATAGTAAACAATGTGATTTCAGGGACTGAAGTTTGTGTGACATTCTTGGAGCCTCACCCCATGCTTGATGATGAGATCAACTGGGTCGAAGAGAATCTACCATTTGTCTGTGGATTGTTTAGAGCTGGGAGAACCAGACTCAACTTAGGAATGTCCCAGTTCTCACATTTAGTAAAGTGCGAGCGCAGCATGAAGAAATCTTTTTACACGATTTACCCTACGAAAGGTGAGATTTGGGCAGTGTACAAGAACTGGAATGCCGGATGGAAGCAATCTGATTATAGTGACTTCCAATGCCGGGTTGTCGAGATCCTTTCAGATTTCTCCGAGGACGCGGAGATGAGAATAGCCAGCTTGATTGAGGTGAAGGGTTGTATGACTTTCTTTCAGAGGCAACTGTATGATGGCTTTGAGTTGATCCGGTCAGTTTCAAAAACGGAGATGCTTTGTTTCTCTCACCGGATACCGGCTTTCATTGTTCCTGGAATCGAAAGCCATGGTATCCCCGAAGGCTCTTGGCACCTGGAACCTGATGCATTGCCTCCCATGCTCCACAACTAG 2259 0.4462 MDCDKVEAAIREKETAETMIENCDYMGAREKLIKACNLFPALDNISQMITVCDILCTTDFRLPGCVTDWYWVLQTNAAADESHIKSKYLMLTNLLEPIKNKFPGTKSALTLVHKAFSVLSDKEKRSEFDSKRAVSWDLHGSVNLQEPSDLEIMKEERTPTSQSSSGCKRIFSEISDRSNGVSNSRKLPSKRLGDLGGVRNSAMSMGSEVLAVSHAIDEQREKICAQEVSWVPACINNIGNAGVKRPVGSMGSPMGFGSSFGSPSWSMNSMTCKGPDPDYYDFDKNRKAELFAVGQLWAAYDQENMPRNYARINSIGHSPFKLCITRLKPAPVTADERRWCEVGLPVACGPFDLDRSNMVVGGRMVFSHMVYQVQGLTNEQVEIYPQKGEVWAIYRDWQPFDWCSDPETMKGCRFQMVEIITGYSKQKGVMVAGLAKVEGFKSIFQRYSNKGSEFSFQVPVNDLFMFSHKVPAFIFKGGERDKVSDGMFELDPLAVPGDFIGDMAKPSEEGSSSNCSSLTHHSSLTPPISSGGDTRSLKPKWSWKDFTSDQIWAIYDGPDSMPRRYAIVNNVISGTEVCVTFLEPHPMLDDEINWVEENLPFVCGLFRAGRTRLNLGMSQFSHLVKCERSMKKSFYTIYPTKGEIWAVYKNWNAGWKQSDYSDFQCRVVEILSDFSEDAEMRIASLIEVKGCMTFFQRQLYDGFELIRSVSKTEMLCFSHRIPAFIVPGIESHGIPEGSWHLEPDALPPMLHN* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00140 752 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Eupl04g00140 752 MobiDBLite consensus disorder prediction 507 535 - -
Eupl04g00140 752 SUPERFAMILY Chaperone J-domain 66 132 IPR036869 -
Eupl04g00140 752 MobiDBLite consensus disorder prediction 505 535 - -
Eupl04g00140 752 SMART dnaj_3 67 124 IPR001623 -
Eupl04g00140 752 MobiDBLite consensus disorder prediction 175 195 - -
Eupl04g00140 752 Pfam DnaJ domain 68 129 IPR001623 -
Eupl04g00140 752 Gene3D DnaJ domain 66 185 IPR036869 -
Eupl04g00140 752 PANTHER ENDOSOME ANTIGEN-LIKE PROTEIN, PUTATIVE (DUF3444)-RELATED 189 749 - -
Eupl04g00140 752 Pfam Domain of unknown function (DUF3444) 542 728 IPR024593 -
Eupl04g00140 752 Pfam Domain of unknown function (DUF3444) 270 477 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00140 Eupl-Chr4 2404429 2407843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00140 16 129 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.000 6.87e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00140 - - vvi:104881643 744.577