Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00134 ATGGAGGAAGGGAATGGATTGAAGGAAGCACTGATCAGGCGCAGAGATGAATCAGGTGAAGAAAATAATATGAGAAGAGAAGAGAAGGAGAAGAAGAGTGTTCCATTTTACAAGTTGTTCTCCTTCGCAGACTCCACTGACGTGATCTTGGTGGGTCAGCTCATCCAGATTGTAGCGACATTCATAATAGGCATCACAATGGCACTTACTCAAGCATGGCTCCTTACCCTTGTTATGATATCAGTTGTTCCTCTTCTTGTGATCTCTGCCTTTTTAGTGGGTAAATTTATGACTAAGATTGCAATCAGTCATCTCAAAGCTTACTCAGAAGCAGAGGATGTCGTAGAACAAACAATTGGTTCGATTAGAACGATCGCATCATATACTGGAGAGAAGCGAGCTATATGTAAACACAACAAATCTCTACAGACCGCTTATGAGTCCAGTGTTAAAGATGGGTTGGTTGCAGGCATAGTAGTTGCTTTCTTTATGTTTCTCATTCACTGCAGCGACGCATTGGGTTCACACTCGGAACTCAAAAATCTAAATGGAGCATACTGTCAACTTATCCGCTTTCAAGAAGTGAACCAAGAGTTCGAACAACATAGTAGTGATCACAACCAGAAGGAGATTACGTCAGATTCTAGTTGGGAACAAAATCCTTCTGGTTCTGATGGGAGCTACATCCATCACTCAGTCTCATTTGAGAATGTCCAAGAAACTGAAGCACTAGAAATCTACAAGTTGACAGCATTGCAGCAGACACATGAAGTCGGTCTCCACCACCTTGTGTTTCTCAACAAGATGGAGCTATCGGTACTGCTACTTGGTGTCTTAGCTGCACTCATCAATGGCCTTATACAACCCATTTCTGGGATTTTCATTTCTAGTACAGCTCAAATATTCTACGAGACACCAAGCAAGCTACAGAATGGTGCAAGGTTTTGGTCATTAATGTATGTCATCCTCGCGCTAGTATCATTTGCGGCGTCCATGGGAGAAACATATTTCTTGACTATGGCGGGTTGTCAGTTGGTAAAGAGGATTCGATCTTTGTCTTTCGAAAAGGTGGTGCACATGGAGATCAGTTGGTTTGACAATGCCAATAACTCAAGTGGAGCAATCGGTGCGAGGCTGTCTACAAACTCAGCAACCATCCTAAATGTTGTCAATATATCACTTTCATTGGTTGTCCAGAACACTGTGACAATAACAACTGGTCTGGTAATTGCTTTTGCAGCAAGTTGGCAACTGGCTTTGATGACCCTAGCTTTGATACCTCTGATAGGCATTAGTGCACGGGCAGAAGTGAAATTTGTTGGAGGATTCAATGCAGAGGCACAGAAGATGTATGAGGACGCAAGTCAAGTTGCTAAAGGTGCAATTGGAAGTATAAGAACTATCGCTTCTTTCTGTGCTGAAGAGAAGGTGATGCAACTGTTCGAAAGGAAATCCACTTTCTATGCTGGAGCCCGACTTGTCGATGAAGGGAAGGCATCATTGTTCTCAGTTTTCTGTGTTCAATATGCCCTCATAGTGGCATTCATTGGAGTTTCTCGGTCATTCTATGCATCTGATATCACCAAATTCAAGGATGCTATCATTTCTTTACTTGCTATTATCAACTGCAAGTCCAAAATTGATCCATCCTGTGATTCAGGAAGAACATTAGAACGCGTGACAGGAGAAATTGAATTTCAGCATGTCAGCTTTAAGACCCTTCGAGGCCAGATGTTCAAATTTTCCACGACTTTTGCTTGTCTGTTCAAGCTGGCATGTGGAGCTTCGACGATCCTTTCGTCGCCTGAGAAAATGGCGTTCTCAACCGCATTATCTTCTCCGGTCTGTCTTCACAACAATCCACACCCAAACACTAGCCCTAATCGTTCCCCTCCTACATTCAACAGAAGGCGAACCAAAACCCTAACCCTAAAAGCTCTTCCACCACTCTCCACCGCTGCCGATGTTTCGGCAGTCGTCGCCCCCTTCGACAGCACAACCCTCGCGGTTCTGGGTGGTGGCTCGGTTGCTGCTTTGGCCGCCGTTCTCTCCCTTGCCGACCCTGAGAAGCGGCGCCAGCTCCAAGCCGAGGAGGTCGGCGGCGGTGATAAGGAGGTTGTGAAGGAGTATTTCAACAATAATGGGTTCCAGAGATGGAAGAAAATCTACGGAGAGACCGACGACGTGAACAAAGTTCAGCTCGATATCAGGGTTGGCCATTCCAAGACAGTCGAGAACGTTATGAAGATGCTCACCGAAGAGGGCTCTCTCCAAGGAGTCACAGTTTGCGACGCCGGTTGCGGCACTGGATGCCTATCGATTCCGCTCGCCAAGCAAGGCGCAATCGTCTCAGCCAGCGATATCTCCGCTGCAATGGTCGCCGAGGCGGAGAAACAGGCAAGAGAAGAGCTTCTGAGAGACAACAGTGATGGCTCGCCGGTGCCCGTGATGCCAAAGTTTGAGGTGAGTGATTTAGAGAGCTTGGACGGGAAGTACGACACAGTGGTTTGTTTAGATGTGTTGATACATTACCCACAGAATAAAGCAGATGGGATGATTGCACACTTGGCATCATTGGCGGAGAAGCGGTTGCTACTGAGCTTCGCCCCCAAGACATTCTACTATAGTCTGTTGAAGAGGGTGGGAGAGCTGTTCCCAGGGCCGTCGAAGGCAACAAGGGCTTACCTCCATGCAGAGGCAGATGTAGAGAGGGCATTACAGAAGGTAGGGTGGAGGATAAGGAAGAGAGGCCTTGTCACAACTCAGTTCTACTTCGCAAAGCTGGTCGAGGCTGTTCCTGCCTAG 2805 0.4663 MEEGNGLKEALIRRRDESGEENNMRREEKEKKSVPFYKLFSFADSTDVILVGQLIQIVATFIIGITMALTQAWLLTLVMISVVPLLVISAFLVGKFMTKIAISHLKAYSEAEDVVEQTIGSIRTIASYTGEKRAICKHNKSLQTAYESSVKDGLVAGIVVAFFMFLIHCSDALGSHSELKNLNGAYCQLIRFQEVNQEFEQHSSDHNQKEITSDSSWEQNPSGSDGSYIHHSVSFENVQETEALEIYKLTALQQTHEVGLHHLVFLNKMELSVLLLGVLAALINGLIQPISGIFISSTAQIFYETPSKLQNGARFWSLMYVILALVSFAASMGETYFLTMAGCQLVKRIRSLSFEKVVHMEISWFDNANNSSGAIGARLSTNSATILNVVNISLSLVVQNTVTITTGLVIAFAASWQLALMTLALIPLIGISARAEVKFVGGFNAEAQKMYEDASQVAKGAIGSIRTIASFCAEEKVMQLFERKSTFYAGARLVDEGKASLFSVFCVQYALIVAFIGVSRSFYASDITKFKDAIISLLAIINCKSKIDPSCDSGRTLERVTGEIEFQHVSFKTLRGQMFKFSTTFACLFKLACGASTILSSPEKMAFSTALSSPVCLHNNPHPNTSPNRSPPTFNRRRTKTLTLKALPPLSTAADVSAVVAPFDSTTLAVLGGGSVAALAAVLSLADPEKRRQLQAEEVGGGDKEVVKEYFNNNGFQRWKKIYGETDDVNKVQLDIRVGHSKTVENVMKMLTEEGSLQGVTVCDAGCGTGCLSIPLAKQGAIVSASDISAAMVAEAEKQAREELLRDNSDGSPVPVMPKFEVSDLESLDGKYDTVVCLDVLIHYPQNKADGMIAHLASLAEKRLLLSFAPKTFYYSLLKRVGELFPGPSKATRAYLHAEADVERALQKVGWRIRKRGLVTTQFYFAKLVEAVPA* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00134 934 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 698 916 IPR029063 -
Eupl04g00134 934 Pfam ABC transporter transmembrane region 51 170 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl04g00134 934 Pfam ABC transporter transmembrane region 274 488 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl04g00134 934 MobiDBLite consensus disorder prediction 1 27 - -
Eupl04g00134 934 CDD AdoMet_MTases 761 868 - -
Eupl04g00134 934 MobiDBLite consensus disorder prediction 201 224 - -
Eupl04g00134 934 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 51 170 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl04g00134 934 Gene3D - 562 572 IPR027417 -
Eupl04g00134 934 Gene3D - 174 210 IPR027417 -
Eupl04g00134 934 SUPERFAMILY ABC transporter transmembrane region 50 171 IPR036640 GO:0005524|GO:0016020
Eupl04g00134 934 Gene3D ABC transporter type 1, transmembrane domain 51 173 IPR036640 GO:0005524|GO:0016020
Eupl04g00134 934 Gene3D ABC transporter type 1, transmembrane domain 211 484 IPR036640 GO:0005524|GO:0016020
Eupl04g00134 934 Gene3D ABC transporter type 1, transmembrane domain 486 561 IPR036640 GO:0005524|GO:0016020
Eupl04g00134 934 SUPERFAMILY ABC transporter transmembrane region 270 517 IPR036640 GO:0005524|GO:0016020
Eupl04g00134 934 CDD ABC_6TM_Pgp_ABCB1_D2_like 283 547 - -
Eupl04g00134 934 ProSiteProfiles Magnesium protoporphyrin IX methyltransferase (EC 2.1.1.11) family profile. 600 933 IPR010251 GO:0015995|GO:0046406
Eupl04g00134 934 PANTHER ABC TRANSPORTER B FAMILY 51 173 IPR039421 -
Eupl04g00134 934 Gene3D Vaccinia Virus protein VP39 700 934 IPR029063 -
Eupl04g00134 934 Pfam Magnesium-protoporphyrin IX methyltransferase C-terminus 837 932 IPR010940 GO:0015995|GO:0046406
Eupl04g00134 934 NCBIfam magnesium protoporphyrin IX methyltransferase 703 930 IPR010251 GO:0015995|GO:0046406
Eupl04g00134 934 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 275 485 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00134 Eupl-Chr4 2306920 2317533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00134 173 600 Calmodulin-binding Proteins AT2G36910 24.297 6.49e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00134 K03428 - vvi:100243913 518.464