Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00133 ATGGCGCTCGAGCGGTTAAGTCTCACACCAACACCCGTGGACGGACACCCAAACGCCGTCTCTAACGGTGGGCAAACGTCCGATGACGGAAACAGAGCACCGAGACTCCCTCGTTGGACGAGACAAGAGATACTAGTACTCATACAAGGGAAGAAGGTTGCAGAGAACCGGGTTCGGAGGGGACGAACCGCCGGTTCGGCTTTTGGGTCGAACCCGCTCGAACCCAAATGGGCTTCGGTGTCGTCGTACTGTAAACGGCACGGCGTGAACCGGGGACCTGTTCAATGCCGGAAACGATGGAGCAACCTCGCCGGAGATTTCAAGAAAATCAAAGAATGGGAATTACAGATAAGCGAAGAGGCCGAGTCGTTCTGGGTCATGAGGAACGACTTGAGAAGAGAGAGGAAGTTGCCCGGTTTCTTCGATAGAGAGGTTTATGATATCTTAGACGGAGGGACAGTAACAGCGCCGGAGACGGTGACGGCGGATGAGAAGAGCAATGAAGGGGGGGTAGTGTCGGTGGCGGAGGAGGAGGAGATAGTATTCGATAGCGGTCGAACTGCTGCGGCGGATGATGGCTTGTTTTCGGATTTTGAGCAGTCGGGACAGGAGGCGGATGGGAGCCCGGAGAAGGAGGCAATGGCAACGGAGAGTCCCACGACGACGGTTCCAGTTCCGTTGCCAATTTTGGGTATGGTGAACGAAAAGCCTCCAGCTTCAAATCCTGAGATTGGATCTACATGCCTGGAGGAACGGAAGAGGAGGCGGTTATCATCAGATGAAGGTGGGGATACCAGTCCCCAGGACCAGTTGATCAAAGTCCTAGAGAGGAACAGTAGAATGCTGACAGCCCAACTTGAAGCTCAGAATATCAATTGCCAATTGGATAGGGACCAACAGAAGGACCATGTCGACAGCTTAGTCACTGTTCTTAGCAAGCTCGCAGATGCTCTCGGAAGAATTGCTGATAAGTTATAG 978 0.5327 MALERLSLTPTPVDGHPNAVSNGGQTSDDGNRAPRLPRWTRQEILVLIQGKKVAENRVRRGRTAGSAFGSNPLEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWELQISEEAESFWVMRNDLRRERKLPGFFDREVYDILDGGTVTAPETVTADEKSNEGGVVSVAEEEEIVFDSGRTAAADDGLFSDFEQSGQEADGSPEKEAMATESPTTTVPVPLPILGMVNEKPPASNPEIGSTCLEERKRRRLSSDEGGDTSPQDQLIKVLERNSRMLTAQLEAQNINCQLDRDQQKDHVDSLVTVLSKLADALGRIADKL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00133 325 Coils Coil 272 292 - -
Eupl04g00133 325 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 4 325 - -
Eupl04g00133 325 Gene3D - 39 109 - -
Eupl04g00133 325 MobiDBLite consensus disorder prediction 247 262 - -
Eupl04g00133 325 ProSiteProfiles Myb-like domain profile. 38 104 IPR001005 -
Eupl04g00133 325 Pfam Myb/SANT-like DNA-binding domain 38 127 IPR044822 -
Eupl04g00133 325 MobiDBLite consensus disorder prediction 1 35 - -
Eupl04g00133 325 MobiDBLite consensus disorder prediction 14 29 - -
Eupl04g00133 325 MobiDBLite consensus disorder prediction 198 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00133 Eupl-Chr4 2301450 2305171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00133 24 112 Trihelix Transcription Factor Family AT1G76890 29.213 4.12e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl04g00133 Myb_DNA-bind_4 3.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00133 - - nnu:104591861 471.47