Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00132 ATGGTTAAAGACAGTCAAAATTCAATGTTTACTGGAATTTCTCAGAGCGACGAGGAAATGGAAGGCGAATCGGCTGTTGATACAGCGACGAAGTGCGTGGTCAAGCGTCTTCAGAATATTGTCTCGGAGGAAGCTTCTGCGGGGAGGAGGGTTAGCCCGAGGCTGCAGAGCCGATCAGGAAGAGAAAGACCTTATTACGATAGTCGTCCAAAGGCCTCATTTGATCTCGAGGAAGACGAAGTCAGCTGGAAGAAGACTAATGTTTACCATAGAAGGAAAGGAAATATGATAAATGTGGGTGAAAAAGAGGTTAATTCTCCGGTGGTTTCATTGTCCGATGAGGCGATGGATTCTAGTGTTGAGTGTGGTGATTTGGTGAATCTAGATTTAAAAGATGTCAAAGAGAAAGGGATAGGTAGTTGCAGCAGTTCAGCTGATGTAGTAGGAAAGAGCTTCTATGCTAGAGTGAAGGAGACGATAAGGGCTTTTAATAAACATTATCTTCACTTCGTTCAGGAAGAGGAACAGAGGTGCAAGAAAATAGAAGTCAATGTTCCAAAAATCCCCAAAGGTTCAAAATCTAAGAAAGGGAATGCATCTGCAGAGGATGCCAAGCGGTCTGCCAAACGACCTGATCTGAAGGCAATATCCAAGATGATTGAGACTAAGGCTATTTTGTACCCCAGTAAAAGATTTGGTCAGCTTCCAGGCATTGATGTTGGGCATCAATTCTTTTCAAGGGCTGAAATGGTTGCTACAGGTTTTCATAGTCACTGGTTGAATGGAATTGATTACATGGGAGCCGCCTACAAGAAACTGGAGGAATACAAGGTCTATGTTTTCCCACTTGCAGTATCAATTGTGTTATCAGGCCAGTATGAAGATGATTTGGATAACTCAGAAGATGTTGTGTATACCGGTCAAGGTGGACATAATTTATGTGGTGATAAGCGTCAAATTAATGATCAAGTGATGCTTCGTGGTAATTTGGCACTTAAGAATAATATAGAGCAATGTGTGCCTGTGAGAGTAACTCGTGGACATGAATCTGCAAATAGTTACTGCGGCAGGGTTTACACATATGATGGCTTGTACAAGGTCGTTGAATATTGGGCTGACAAAGGTGCTTCTGGATTTACCGTTTTTAAGTTTCGGCTAAGACGGCTTGAAGGGCAGCCAACATTGACCACTAATCAGGTTCAGTTTATTCGAGCACGTGCACCTAAATCTCTTTCAGAACTACGTGGGTTGGTATGCAACGATATAAGTGGAGGTCAAGAAGGGATTCCAATTCCAGCTACCAATTTGGTTGATGATCCCCCTGTTGGACCTATGGATTATTCATATTGCAAATCTATCCAAGTTGCGAAAAGTGTGAAGCTCCCCATGAATGCCACTGGGTGCAATTGCAGAGGAACTTGTATTGATCCCAGGACTTGTGCTTGTGCAAGACTTAATGGCTCTGACTTTCCATATGTGCATAAAGATGGTGGCAGATTAGTCGAAGCCAAGGCTGTTGTGTTTGAATGTGGGCCAAACTGTGGTTGCGGACCTGGTTGTGTCAACCGGACATCTCAGCGTGGATTGAAGTACCGACTTGAGGTCTTCCGAACGCCAAATAAAGGATGGGCTGTAAGGTCCTGGGATTTTATTCCTTCTGGGGCACCTGTATGTGAATACACAGGAATACTTATGAGGACCAATGATTTGGATAATGTTTCTGAGAATAACTTCATTTTTGAGATTGATTGCTTGCAAACAATGAAGGGGCTTGATGGAAGAGAGAGGCGTTTGGGAGATGTATATATACCTACAAGTTCTCATCTGGATAAAATTGATGACAAGAAATCAGAAAGTGTGCCTGAGTTCTGTATAGATGCAGGCTCAGTTGGTAATATTGCCAGATTCATCAATCATAGCTGCGAGCCTAATCTCTTCGTCCAGTGTGTTTTGAACTCCCACCATGATATCAAACTTGCTCGAGTAATGCTGTTTGCTGCCGACAACATTCCTTCTCTGCAGGAGCTTACGTACGACTATGGCTACGCTCTTGATAGTGTCATTGGTGCAGATGGCAACATTAAAAAGTTGTCATGCTATTGTGGTGCGGCAGACTGTCGGAAGCGTTTATACTAG 2136 0.4326 MVKDSQNSMFTGISQSDEEMEGESAVDTATKCVVKRLQNIVSEEASAGRRVSPRLQSRSGRERPYYDSRPKASFDLEEDEVSWKKTNVYHRRKGNMINVGEKEVNSPVVSLSDEAMDSSVECGDLVNLDLKDVKEKGIGSCSSSADVVGKSFYARVKETIRAFNKHYLHFVQEEEQRCKKIEVNVPKIPKGSKSKKGNASAEDAKRSAKRPDLKAISKMIETKAILYPSKRFGQLPGIDVGHQFFSRAEMVATGFHSHWLNGIDYMGAAYKKLEEYKVYVFPLAVSIVLSGQYEDDLDNSEDVVYTGQGGHNLCGDKRQINDQVMLRGNLALKNNIEQCVPVRVTRGHESANSYCGRVYTYDGLYKVVEYWADKGASGFTVFKFRLRRLEGQPTLTTNQVQFIRARAPKSLSELRGLVCNDISGGQEGIPIPATNLVDDPPVGPMDYSYCKSIQVAKSVKLPMNATGCNCRGTCIDPRTCACARLNGSDFPYVHKDGGRLVEAKAVVFECGPNCGCGPGCVNRTSQRGLKYRLEVFRTPNKGWAVRSWDFIPSGAPVCEYTGILMRTNDLDNVSENNFIFEIDCLQTMKGLDGRERRLGDVYIPTSSHLDKIDDKKSESVPEFCIDAGSVGNIARFINHSCEPNLFVQCVLNSHHDIKLARVMLFAADNIPSLQELTYDYGYALDSVIGADGNIKKLSCYCGAADCRKRLY* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00132 711 ProSiteProfiles Post-SET domain profile. 695 711 IPR003616 -
Eupl04g00132 711 Pfam Pre-SET motif 423 523 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl04g00132 711 SMART PostSET_3 695 711 IPR003616 -
Eupl04g00132 711 SMART set_7 531 687 IPR001214 GO:0005515
Eupl04g00132 711 ProSiteProfiles Pre-SET domain profile. 466 528 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl04g00132 711 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 66 711 IPR025794 GO:0016571
Eupl04g00132 711 SMART preset_2 419 515 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl04g00132 711 MobiDBLite consensus disorder prediction 187 210 - -
Eupl04g00132 711 MobiDBLite consensus disorder prediction 1 18 - -
Eupl04g00132 711 Pfam SAD/SRA domain 231 392 IPR003105 -
Eupl04g00132 711 ProSiteProfiles SET domain profile. 531 681 IPR001214 GO:0005515
Eupl04g00132 711 MobiDBLite consensus disorder prediction 43 69 - -
Eupl04g00132 711 MobiDBLite consensus disorder prediction 196 210 - -
Eupl04g00132 711 SUPERFAMILY SET domain 415 687 IPR046341 -
Eupl04g00132 711 MobiDBLite consensus disorder prediction 55 69 - -
Eupl04g00132 711 ProSiteProfiles YDG domain profile. 233 388 IPR003105 -
Eupl04g00132 711 Pfam SET domain 542 681 IPR001214 GO:0005515
Eupl04g00132 711 SUPERFAMILY PUA domain-like 215 402 IPR015947 -
Eupl04g00132 711 Gene3D SET domain 414 711 IPR046341 -
Eupl04g00132 711 SMART G9a_1 228 392 IPR003105 -
Eupl04g00132 711 Gene3D - 216 408 IPR036987 -
Eupl04g00132 711 MobiDBLite consensus disorder prediction 1 25 - -
Eupl04g00132 711 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 59 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00132 Eupl-Chr4 2254551 2293313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00132 219 711 EF-hand Containing Proteins AT5G13960 66.397 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl04g00132 SAD_SRA 5.4e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00132 K11420 - nnu:104591863 1020.76