Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl04g00124 | ATGACGGCCATGGTATCAGCCTTGGCCCATGTCATCGGCACCGGTGATGAGAATCCGTCTCGAGTGCAAGGAAACCCGTTACCCATATCGGAGTCTGGCATGAGAGAACATGATCTATCACAACAAGCGATACAGGATCAAGGGAACCCAAGGAGAAGACACTACAGAGGAGTAAGGCAGAGACCTTGGGGCAAGTGGGCAGCCGAGATACGTGATCCAAAGAAAGCAGCTCGAGTCTGGCTCGGCACATTCGACACAGCTGAGGGTGCAGCCATTGCCTACGATCAAGCAGCTCTCAAGTTCAAAGGAACCAAAGCTAAACTCAATTTTCCTGAACGAGTTCAAGGGAGGACTGAGTTGAGCTATTTCATGGGCCGTCATGACTCTAGCGTCGTCGTCACCGGAGGACTTCCCGAATCGGTTGTTCCACCTCCTCCTCTCTCTCAAGACACGTACCCAGACCTTTATCAGTATGCGCAACTTCTTTGCAGTAAAGATGAAGATTTACAGAACGTCGCATCGGGTTTATATAATCGAGAACCCTTTGTTTCACCATCTTCATCGAACTCTTCATCAGTAACATCTCAACAACAAGAACTTCAGAGGTTTTCATCTCAGTTTGGAAGCTCTTCTACTATTAGCTCTGAACATCCTGACCATGGAAGAGACACAGATAGCTACCAGCCAAGAGAGTAG | 696 | 0.4856 | MTAMVSALAHVIGTGDENPSRVQGNPLPISESGMREHDLSQQAIQDQGNPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEGAAIAYDQAALKFKGTKAKLNFPERVQGRTELSYFMGRHDSSVVVTGGLPESVVPPPPLSQDTYPDLYQYAQLLCSKDEDLQNVASGLYNREPFVSPSSSNSSSVTSQQQELQRFSSQFGSSSTISSEHPDHGRDTDSYQPRE* | 232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl04g00124 | 231 | PANTHER | DNA-BINDING DOMAIN | 41 | 203 | IPR044808 | GO:0003700|GO:0009873 | |
Eupl04g00124 | 231 | MobiDBLite | consensus disorder prediction | 216 | 231 | - | - | |
Eupl04g00124 | 231 | CDD | AP2 | 54 | 112 | IPR001471 | GO:0003700|GO:0006355 | |
Eupl04g00124 | 231 | FunFam | Ethylene-responsive transcription factor 2 | 53 | 112 | - | - | |
Eupl04g00124 | 231 | SUPERFAMILY | DNA-binding domain | 54 | 112 | IPR016177 | GO:0003677 | |
Eupl04g00124 | 231 | Gene3D | AP2/ERF domain | 53 | 113 | IPR036955 | GO:0003700|GO:0006355 | |
Eupl04g00124 | 231 | PRINTS | Ethylene responsive element binding protein signature | 77 | 93 | IPR001471 | GO:0003700|GO:0006355 | |
Eupl04g00124 | 231 | PRINTS | Ethylene responsive element binding protein signature | 55 | 66 | IPR001471 | GO:0003700|GO:0006355 | |
Eupl04g00124 | 231 | Pfam | AP2 domain | 54 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Eupl04g00124 | 231 | SMART | rav1_2 | 54 | 117 | IPR001471 | GO:0003700|GO:0006355 | |
Eupl04g00124 | 231 | MobiDBLite | consensus disorder prediction | 183 | 215 | - | - | |
Eupl04g00124 | 231 | MobiDBLite | consensus disorder prediction | 183 | 231 | - | - | |
Eupl04g00124 | 231 | ProSiteProfiles | AP2/ERF domain profile. | 54 | 111 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl04g00124 | Eupl-Chr4 | 2084447 | 2086172 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl04g00124 | 4 | 177 | AP2-EREBP Transcription Factor Family | AT5G13330 | 54.190 | 1.75e-48 | 157 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Eupl04g00124 | AP2 | 1.9e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl04g00124 | - | - | nnu:104592013 | 281.952 |