Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00124 ATGACGGCCATGGTATCAGCCTTGGCCCATGTCATCGGCACCGGTGATGAGAATCCGTCTCGAGTGCAAGGAAACCCGTTACCCATATCGGAGTCTGGCATGAGAGAACATGATCTATCACAACAAGCGATACAGGATCAAGGGAACCCAAGGAGAAGACACTACAGAGGAGTAAGGCAGAGACCTTGGGGCAAGTGGGCAGCCGAGATACGTGATCCAAAGAAAGCAGCTCGAGTCTGGCTCGGCACATTCGACACAGCTGAGGGTGCAGCCATTGCCTACGATCAAGCAGCTCTCAAGTTCAAAGGAACCAAAGCTAAACTCAATTTTCCTGAACGAGTTCAAGGGAGGACTGAGTTGAGCTATTTCATGGGCCGTCATGACTCTAGCGTCGTCGTCACCGGAGGACTTCCCGAATCGGTTGTTCCACCTCCTCCTCTCTCTCAAGACACGTACCCAGACCTTTATCAGTATGCGCAACTTCTTTGCAGTAAAGATGAAGATTTACAGAACGTCGCATCGGGTTTATATAATCGAGAACCCTTTGTTTCACCATCTTCATCGAACTCTTCATCAGTAACATCTCAACAACAAGAACTTCAGAGGTTTTCATCTCAGTTTGGAAGCTCTTCTACTATTAGCTCTGAACATCCTGACCATGGAAGAGACACAGATAGCTACCAGCCAAGAGAGTAG 696 0.4856 MTAMVSALAHVIGTGDENPSRVQGNPLPISESGMREHDLSQQAIQDQGNPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEGAAIAYDQAALKFKGTKAKLNFPERVQGRTELSYFMGRHDSSVVVTGGLPESVVPPPPLSQDTYPDLYQYAQLLCSKDEDLQNVASGLYNREPFVSPSSSNSSSVTSQQQELQRFSSQFGSSSTISSEHPDHGRDTDSYQPRE* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00124 231 PANTHER DNA-BINDING DOMAIN 41 203 IPR044808 GO:0003700|GO:0009873
Eupl04g00124 231 MobiDBLite consensus disorder prediction 216 231 - -
Eupl04g00124 231 CDD AP2 54 112 IPR001471 GO:0003700|GO:0006355
Eupl04g00124 231 FunFam Ethylene-responsive transcription factor 2 53 112 - -
Eupl04g00124 231 SUPERFAMILY DNA-binding domain 54 112 IPR016177 GO:0003677
Eupl04g00124 231 Gene3D AP2/ERF domain 53 113 IPR036955 GO:0003700|GO:0006355
Eupl04g00124 231 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Eupl04g00124 231 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Eupl04g00124 231 Pfam AP2 domain 54 103 IPR001471 GO:0003700|GO:0006355
Eupl04g00124 231 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Eupl04g00124 231 MobiDBLite consensus disorder prediction 183 215 - -
Eupl04g00124 231 MobiDBLite consensus disorder prediction 183 231 - -
Eupl04g00124 231 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00124 Eupl-Chr4 2084447 2086172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00124 4 177 AP2-EREBP Transcription Factor Family AT5G13330 54.190 1.75e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl04g00124 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00124 - - nnu:104592013 281.952